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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123425981   protein CHROMATIN REMODELING 4 
 tae-r.2   123044744   protein CHROMATIN REMODELING 4 
 tae-r.2   123052609   protein CHROMATIN REMODELING 4 
 tae-r.2   123188484   protein CHROMATIN REMODELING 4 
 bdi-r.1   100822490   protein CHROMATIN REMODELING 4 
 osa-u.5   4343299   protein CHROMATIN REMODELING 4 
 zma-u.5   103647692   protein CHROMATIN REMODELING 4 
 zma-u.5   103633189   Protein CHROMATIN REMODELING 4 
 sbi-r.1   8080707   protein CHROMATIN REMODELING 4 
 ath-u.5   CHR4   chromatin remodeling 4 
 gma-u.5   100815815   protein CHROMATIN REMODELING 4 
 gma-u.5   100793933   protein CHROMATIN REMODELING 4 
 sly-u.5   101248171   protein CHROMATIN REMODELING 4 
 bra-r.6   103839156   protein CHROMATIN REMODELING 4 
 vvi-u.5   100247555   protein CHROMATIN REMODELING 4 
 ppo-u.5   18093999   protein CHROMATIN REMODELING 4 
 ppo-u.5   7479205   protein CHROMATIN REMODELING 4 
 mtr-u.5   11415434   protein CHROMATIN REMODELING 4 
 ghi-r.1   107945231   protein CHROMATIN REMODELING 4 
 ghi-r.1   107935852   protein CHROMATIN REMODELING 4 
 bna-r.1   106366687   protein CHROMATIN REMODELING 4 
 bna-r.1   106345862   protein CHROMATIN REMODELING 4 
 bna-r.1   125580398   protein CHROMATIN REMODELING 4-like 
 sot-r.1   102595637   protein CHROMATIN REMODELING 4 
 cit-r.1   102618865   protein CHROMATIN REMODELING 4 
 nta-r.1   107769008   protein CHROMATIN REMODELING 4 
 nta-r.1   107777459   protein CHROMATIN REMODELING 4 

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Top 50 coexpressed genes to 123425981 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123425981 (hvu-r.1 coexpression data)

CoexMap"123425981"


hvuLOC123425981 | Entrez gene ID : 123425981    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 1 2 1 1 1 2 1 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (22 genes)  IEA  
GO:0006338 [list] [network] chromatin remodeling  (177 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (307 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (49 genes)  IEA  
GO:0042393 [list] [network] histone binding  (56 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (134 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (576 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2113 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044965690.1 [sequence] [blastp]
XP_044965691.1 [sequence] [blastp]
XP_044965692.1 [sequence] [blastp]
XP_044965693.1 [sequence] [blastp]
XP_044965694.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  vacu 1,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_044965690.1)
nucl 6,  vacu 1,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_044965691.1)
nucl 6,  vacu 1,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_044965692.1)
nucl 6,  vacu 1,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_044965693.1)
nucl 6,  vacu 1,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  chlo_mito 1,  cyto_E.R. 1  (predict for XP_044965694.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_044965690.1)
chlo 8,  other 3  (predict for XP_044965691.1)
chlo 8,  other 3  (predict for XP_044965692.1)
chlo 8,  other 3  (predict for XP_044965693.1)
chlo 8,  other 3  (predict for XP_044965694.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123425981
tae-r.2
for
123044744
tae-r.2
for
123052609
tae-r.2
for
123188484
bdi-r.1
for
100822490
osa-u.5
for
4343299
zma-u.5
for
103647692
zma-u.5
for
103633189
sbi-r.1
for
8080707
ath-u.5
for
CHR4
gma-u.5
for
100815815
gma-u.5
for
100793933
sly-u.5
for
101248171
bra-r.6
for
103839156
vvi-u.5
for
100247555
ppo-u.5
for
18093999
ppo-u.5
for
7479205
mtr-u.5
for
11415434
ghi-r.1
for
107945231
ghi-r.1
for
107935852
bna-r.1
for
106366687
bna-r.1
for
106345862
bna-r.1
for
125580398
sot-r.1
for
102595637
cit-r.1
for
102618865
nta-r.1
for
107769008
nta-r.1
for
107777459


Ortholog ID: 9140
Species hvu tae tae tae bdi osa zma zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC123425981 LOC123044744 LOC123052609 LOC123188484 LOC100822490 LOC4343299 LOC103647692 LOC103633189 LOC8080707 CHR4 LOC100815815 LOC100793933 LOC101248171 LOC103839156 LOC100247555 LOC18093999 LOC7479205 LOC11415434 LOC107945231 LOC107935852 LOC106366687 LOC106345862 LOC125580398 LOC102595637 LOC102618865 LOC107769008 LOC107777459
Function* protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 Protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 chromatin remodeling 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4-like protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00310 Lysine degradation 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123425981 123044744 123052609 123188484 100822490 4343299 103647692 103633189 8080707 834510 100815815 100793933 101248171 103839156 100247555 18093999 7479205 11415434 107945231 107935852 106366687 106345862 125580398 102595637 102618865 107769008 107777459
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