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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123428135   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 
 hvu-r.1   123427448   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 
 tae-r.2   543217   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 
 tae-r.2   123054920   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 
 tae-r.2   123190014   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic-like 
 bdi-r.1   100834273   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 
 bdi-r.1   100827466   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 
 osa-u.5   4335317   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 
 zma-u.5   542379   dihydrodipicolinate synthase 1 
 zma-u.5   100282239   dihydrodipicolinate synthase 2 
 sbi-r.1   8058459   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 sbi-r.1   8060419   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 
 ath-u.5   DHDPS2   dihydrodipicolinate synthase 
 ath-u.5   DHDPS1   dihydrodipicolinate synthase 1 
 gma-u.5   100788930   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 gma-u.5   100806626   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 gma-u.5   DHPS1   dihydrodipicolinate synthase 
 sly-u.5   101250089   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 
 sly-u.5   101250558   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 bra-r.6   103866210   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 
 bra-r.6   103862855   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 
 bra-r.6   103866894   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 
 vvi-u.5   100262665   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 ppo-u.5   7461723   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 ppo-u.5   7488907   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 mtr-u.5   25484755   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 mtr-u.5   25501006   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 mtr-u.5   25501008   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 ghi-r.1   107945622   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 
 ghi-r.1   107900865   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 ghi-r.1   121204469   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 bna-r.1   111213954   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 
 bna-r.1   106452154   4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 
 bna-r.1   106405353   4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 
 sot-r.1   102582563   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 sot-r.1   102581931   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 
 cit-r.1   102610554   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 
 nta-r.1   107823498   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 
 nta-r.1   107786069   4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 
 cre-r.1   CHLRE_02g107300v5   uncharacterized protein 

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Top 50 coexpressed genes to 123428135 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123428135 (hvu-r.1 coexpression data)

CoexMap"123428135"


hvuLOC123428135 | Entrez gene ID : 123428135    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 1 2 2 2 3 2 3 1 2 3 3 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg00261 [list] [network] Monobactam biosynthesis (12 genes)
hvg00300 [list] [network] Lysine biosynthesis (15 genes)
hvg01230 [list] [network] Biosynthesis of amino acids (224 genes)
GO BP
GO:0009089 [list] [network] lysine biosynthetic process via diaminopimelate  (13 genes)  IEA  
GO CC
GO MF
GO:0008840 [list] [network] 4-hydroxy-tetrahydrodipicolinate synthase activity  (3 genes)  IEA  
Protein XP_044968235.1 [sequence] [blastp]
XP_044968236.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_044968235.1)
chlo 9,  mito 1  (predict for XP_044968236.1)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for XP_044968235.1)
chlo 9,  mito 3  (predict for XP_044968236.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123428135
hvu-r.1
for
123427448
tae-r.2
for
543217
tae-r.2
for
123054920
tae-r.2
for
123190014
bdi-r.1
for
100834273
bdi-r.1
for
100827466
osa-u.5
for
4335317
zma-u.5
for
542379
zma-u.5
for
100282239
sbi-r.1
for
8058459
sbi-r.1
for
8060419
ath-u.5
for
DHDPS2
ath-u.5
for
DHDPS1
gma-u.5
for
100788930
gma-u.5
for
100806626
gma-u.5
for
DHPS1
sly-u.5
for
101250089
sly-u.5
for
101250558
bra-r.6
for
103866210
bra-r.6
for
103862855
bra-r.6
for
103866894
vvi-u.5
for
100262665
ppo-u.5
for
7461723
ppo-u.5
for
7488907
mtr-u.5
for
25484755
mtr-u.5
for
25501006
mtr-u.5
for
25501008
ghi-r.1
for
107945622
ghi-r.1
for
107900865
ghi-r.1
for
121204469
bna-r.1
for
111213954
bna-r.1
for
106452154
bna-r.1
for
106405353
sot-r.1
for
102582563
sot-r.1
for
102581931
cit-r.1
for
102610554
nta-r.1
for
107823498
nta-r.1
for
107786069
cre-r.1
for
CHLRE_02g107300v5


Ortholog ID: 3566
Species hvu hvu tae tae tae bdi bdi osa zma zma sbi sbi ath ath gma gma gma sly sly bra bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta cre
Symbol LOC123428135 LOC123427448 LOC543217 LOC123054920 LOC543218 LOC100834273 LOC100827466 LOC4335317 LOC542379 LOC100282239 LOC8058459 LOC8060419 DHDPS2 DHDPS1 LOC100788930 LOC100806626 DHPS1 LOC101250089 LOC101250558 LOC103866210 LOC103862855 LOC103866894 LOC100262665 LOC7461723 LOC7488907 LOC25501006 LOC25501008 LOC25501009 LOC107945622 LOC107900865 LOC121210886 LOC111213954 LOC106452154 LOC106396899 LOC102582563 LOC102581931 LOC102610554 LOC107823498 LOC107786069 CHLRE_02g107300v5
Function* 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic dihydrodipicolinate synthase 1 dihydrodipicolinate synthase 2 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic dihydrodipicolinate synthase dihydrodipicolinate synthase 1 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic dihydrodipicolinate synthase 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu00300 Lysine biosynthesis 3
hvu00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 2
tae04626 Plant-pathogen interaction 2
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00670 One carbon pool by folate 3
tae00240 Pyrimidine metabolism 2
tae00790 Folate biosynthesis 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03018 RNA degradation 3
tae00261 Monobactam biosynthesis 3
tae00300 Lysine biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
bdi00261 Monobactam biosynthesis 2
bdi00300 Lysine biosynthesis 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 3
bdi03420 Nucleotide excision repair 2
bdi03010 Ribosome 2
bdi00261 Monobactam biosynthesis 2
bdi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa00300 Lysine biosynthesis 3
osa00250 Alanine, aspartate and glutamate metabolism 3
osa00230 Purine metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04626 Plant-pathogen interaction 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 4
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath00300 Lysine biosynthesis 3
ath01230 Biosynthesis of amino acids 3
ath00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00300 Lysine biosynthesis 5
ath01210 2-Oxocarboxylic acid metabolism 4
ath00261 Monobactam biosynthesis 3
ath00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma01210 2-Oxocarboxylic acid metabolism 3
gma03013 Nucleocytoplasmic transport 2
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 7
gma01200 Carbon metabolism 7
gma01210 2-Oxocarboxylic acid metabolism 7
gma00020 Citrate cycle (TCA cycle) 6
gma00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly03013 Nucleocytoplasmic transport 3
sly00261 Monobactam biosynthesis 2
sly00300 Lysine biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00261 Monobactam biosynthesis 2
bra00300 Lysine biosynthesis 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra00261 Monobactam biosynthesis 2
bra00300 Lysine biosynthesis 2
bra01230 Biosynthesis of amino acids 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00261 Monobactam biosynthesis 3
bra00300 Lysine biosynthesis 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi00261 Monobactam biosynthesis 4
ghi00300 Lysine biosynthesis 4
ghi03010 Ribosome 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi00261 Monobactam biosynthesis 4
ghi00300 Lysine biosynthesis 4
ghi03010 Ribosome 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi00261 Monobactam biosynthesis 4
ghi00300 Lysine biosynthesis 4
ghi03010 Ribosome 3
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot00261 Monobactam biosynthesis 2
sot00300 Lysine biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot01230 Biosynthesis of amino acids 3
sot00230 Purine metabolism 2
sot03082 ATP-dependent chromatin remodeling 2
sot00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit00190 Oxidative phosphorylation 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre00230 Purine metabolism 3
cre01232 Nucleotide metabolism 3
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123428135 123427448 543217 123054920 543218 100834273 100827466 4335317 542379 100282239 8058459 8060419 819152 825259 100788930 100806626 548067 101250089 101250558 103866210 103862855 103866894 100262665 7461723 7488907 25501006 25501008 25501009 107945622 107900865 121210886 111213954 106452154 106396899 102582563 102581931 102610554 107823498 107786069 5725512
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