ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123434884	probable trehalase
tae-r.2	123049002	probable trehalase
tae-r.2	123124209	probable trehalase
tae-r.2	123168174	probable trehalase
bdi-r.1	100843476	probable trehalase
osa-u.5	4349141	probable trehalase
zma-u.5	100280412	trehalase1
sbi-r.1	8062898	probable trehalase
ath-u.5	TRE1	trehalase 1
gma-u.5	TRE1	trehalase 1
sly-u.5	101244979	probable trehalase
bra-r.6	103861669	trehalase
bra-r.6	103861458	trehalase-like
vvi-u.5	100246241	trehalase
ppo-u.5	7497872	trehalase
ppo-u.5	7467057	trehalase
mtr-u.5	25502241	trehalase
ghi-r.1	107904513	trehalase
ghi-r.1	107922859	trehalase
ghi-r.1	107951313	probable trehalase
bna-r.1	111207575	trehalase
bna-r.1	106444527	trehalase
bna-r.1	106414110	trehalase-like
sot-r.1	102579182	probable trehalase
cit-r.1	102617704	probable trehalase
cit-r.1	102619800	trehalase-like
cit-r.1	102614800	probable trehalase
nta-r.1	107800135	probable trehalase
nta-r.1	107790848	putative trehalase
nta-r.1	107790847	putative trehalase
cre-r.1	CHLRE_03g195600v5	uncharacterized protein

Annotation

functional annotation

KEGG

hvg00500 [list] [network] Starch and sucrose metabolism (193 genes)

GO BP

GO:0005993 [list] [network] trehalose catabolic process

(1 genes)

IEA

GO CC

GO MF

GO:0004555 [list] [network] alpha,alpha-trehalase activity

(1 genes)

IEA

Protein

XP_044971475.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 3, extr 1, nucl 1, E.R. 1, golg 1

(predict for XP_044971475.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_044971475.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123434884	tae-r.2 for 123049002	tae-r.2 for 123124209	tae-r.2 for 123168174	bdi-r.1 for 100843476	osa-u.5 for 4349141	zma-u.5 for 100280412	sbi-r.1 for 8062898	ath-u.5 for TRE1	gma-u.5 for TRE1	sly-u.5 for 101244979	bra-r.6 for 103861669	bra-r.6 for 103861458	vvi-u.5 for 100246241	ppo-u.5 for 7497872	ppo-u.5 for 7467057	mtr-u.5 for 25502241	ghi-r.1 for 107904513	ghi-r.1 for 107922859	ghi-r.1 for 107951313	bna-r.1 for 111207575	bna-r.1 for 106444527	bna-r.1 for 106414110	sot-r.1 for 102579182	cit-r.1 for 102617704	cit-r.1 for 102619800	cit-r.1 for 102614800	nta-r.1 for 107800135	nta-r.1 for 107790848	nta-r.1 for 107790847	cre-r.1 for CHLRE_03g195600v5

Ortholog

Ortholog ID: 6051

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

TRE1

Function^*

probable trehalase

trehalase1

probable trehalase

trehalase 1

probable trehalase

trehalase

trehalase-like

trehalase

probable trehalase

trehalase

trehalase-like

trehalase

probable trehalase

trehalase-like

probable trehalase

putative trehalase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	5
tae04146	Peroxisome	4
tae00071	Fatty acid degradation	3
tae00280	Valine, leucine and isoleucine degradation	3
tae00410	beta-Alanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	7
tae00280	Valine, leucine and isoleucine degradation	6
tae00010	Glycolysis / Gluconeogenesis	3
tae00053	Ascorbate and aldarate metabolism	3
tae00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	5
tae00410	beta-Alanine metabolism	5
tae04146	Peroxisome	5
tae00071	Fatty acid degradation	4
tae01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	5
bdi01200	Carbon metabolism	3
bdi00330	Arginine and proline metabolism	2
bdi00195	Photosynthesis	2
bdi00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	3
osa00052	Galactose metabolism	2
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	9
zma04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2
sbi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	3
gma00513	Various types of N-glycan biosynthesis	3
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	4
sly00010	Glycolysis / Gluconeogenesis	3
sly00500	Starch and sucrose metabolism	3
sly01230	Biosynthesis of amino acids	3
sly00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2
bra00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
vvi01230	Biosynthesis of amino acids	5
vvi04141	Protein processing in endoplasmic reticulum	3
vvi03060	Protein export	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00350	Tyrosine metabolism	3
mtr01230	Biosynthesis of amino acids	3
mtr00360	Phenylalanine metabolism	2
mtr00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
mtr00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	16
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3
cit00620	Pyruvate metabolism	2
cit00710	Carbon fixation by Calvin cycle	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3
cit00620	Pyruvate metabolism	2
cit00710	Carbon fixation by Calvin cycle	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3
cit00620	Pyruvate metabolism	2
cit00710	Carbon fixation by Calvin cycle	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04122	Sulfur relay system	2

Expression

Expression pattern

Entrez Gene ID^*

123434884

123049002

123124209

123168174

100843476

4349141

100280412

8062898

828504

547539

101244979

103861669

103861458

100246241

7467057

25502241

107904513

107922859

107951313

111207575

106414110

106376007

102579182

102617704

102619800

102614800

107800135

107790848

107800134

5718746

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123434884 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123434884 (hvu-r.1 coexpression data)


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	1	1	1	1	1	1	1	2	1	2	1	3	3	1	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123434884 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123434884 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**