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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123440615  putative E3 ubiquitin-protein ligase LIN-1 
 hvu-r.1  123408014  uncharacterized LOC123408014 
 tae-r.2  123181776  putative E3 ubiquitin-protein ligase LIN-1 
 tae-r.2  123129599  putative E3 ubiquitin-protein ligase LIN-1 
 tae-r.2  123053222  putative E3 ubiquitin-protein ligase LIN-1 
 bdi-r.1  100827665  putative E3 ubiquitin-protein ligase LIN-1 
 osa-u.5  4338548  putative E3 ubiquitin-protein ligase LIN-1 
 zma-u.5  103630225  putative E3 ubiquitin-protein ligase LIN-1 
 sbi-r.1  8077901  putative E3 ubiquitin-protein ligase LIN-1 
 ath-u.5  AT3G06880  Transducin/WD40 repeat-like superfamily protein 
 gma-u.5  100789287  putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5  100782870  putative E3 ubiquitin-protein ligase LIN-1 
 sly-u.5  101256034  putative E3 ubiquitin-protein ligase LIN-1 
 bra-r.6  103859188  putative E3 ubiquitin-protein ligase LIN-1 
 vvi-u.5  100258504  putative E3 ubiquitin-protein ligase LIN-2 
 ppo-u.5  18101809  putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5  25488113  putative E3 ubiquitin-protein ligase LIN-1 
 ghi-r.1  107935153  putative E3 ubiquitin-protein ligase LIN-1 
 ghi-r.1  107931484  putative E3 ubiquitin-protein ligase LIN-1 
 bna-r.1  106388928  putative E3 ubiquitin-protein ligase LIN-1 
 bna-r.1  106389025  putative E3 ubiquitin-protein ligase LIN-1 
 sot-r.1  102584479  putative E3 ubiquitin-protein ligase LIN 
 cit-r.1  102611723  putative E3 ubiquitin-protein ligase LIN-1 
 nta-r.1  107814463  putative E3 ubiquitin-protein ligase LIN-1 
 nta-r.1  107798703  putative E3 ubiquitin-protein ligase LIN-1 

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Top 50 coexpressed genes to 123440615 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123440615 (hvu-r.1 coexpression data)

CoexMap"123440615"


hvuLOC123440615 | Entrez gene ID : 123440615
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044973118.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cysk_nucl 1  (predict for XP_044973118.1)
Subcellular
localization
TargetP
other 2  (predict for XP_044973118.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123440615


hvu-r.1
for
123408014


tae-r.2
for
123181776


tae-r.2
for
123129599


tae-r.2
for
123053222


bdi-r.1
for
100827665


osa-u.5
for
4338548


zma-u.5
for
103630225


sbi-r.1
for
8077901


ath-u.5
for
AT3G06880


gma-u.5
for
100789287


gma-u.5
for
100782870


sly-u.5
for
101256034


bra-r.6
for
103859188


vvi-u.5
for
100258504


ppo-u.5
for
18101809


mtr-u.5
for
25488113


ghi-r.1
for
107935153


ghi-r.1
for
107931484


bna-r.1
for
106388928


bna-r.1
for
106389025


sot-r.1
for
102584479


cit-r.1
for
102611723


nta-r.1
for
107814463


nta-r.1
for
107798703



Ortholog ID: 9453
Species hvu hvu tae tae tae bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123440615 LOC123408014 LOC123181776 LOC123129599 LOC123053222 LOC100827665 LOC4338548 LOC103630225 LOC8077901 AT3G06880 LOC100789287 LOC100782870 LOC101256034 LOC103859188 LOC100258504 LOC18101809 LOC25488113 LOC107935153 LOC107931484 LOC106388928 LOC106389025 LOC102584479 LOC102611723 LOC107814463 LOC107798703
Function* putative E3 ubiquitin-protein ligase LIN-1 uncharacterized LOC123408014 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 Transducin/WD40 repeat-like superfamily protein putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 6
tae04146 Peroxisome 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00071 Fatty acid degradation 3
tae00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 5
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00591 Linoleic acid metabolism 2
bdi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123440615 123408014 123181776 123129599 123053222 100827665 4338548 103630225 8077901 819873 100789287 100782870 101256034 103859188 100258504 18101809 25488113 107935153 107931484 106388928 106389025 102584479 102611723 107814463 107798703
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