ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	9266773	nuclear transcription factor Y subunit B-1
zma-u.5	103650792	nuclear transcription factor Y subunit B-1
zma-u.5	100304371	uncharacterized LOC100304371
mtr-u.5	25481001	nuclear transcription factor Y subunit B-1
mtr-u.5	11422870	nuclear transcription factor Y subunit B-10
mtr-u.5	25484764	nuclear transcription factor Y subunit B-4

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(404 genes)

IEA

GO CC

GO:0016602 [list] [network] CCAAT-binding factor complex

(23 genes)

IEA

GO MF

GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific	(26 genes)	IEA
GO:0046982 [list] [network] protein heterodimerization activity	(223 genes)	IEA
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(229 genes)	IEA

Protein

XP_044973278.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, nucl 3, chlo 1, cyto 1, extr 1, pero 1, cyto_pero 1

(predict for XP_044973278.1)

Subcellular
localization
TargetP

chlo 5, other 3

(predict for XP_044973278.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 9266773	zma-u.5 for 103650792	zma-u.5 for 100304371	mtr-u.5 for 25481001	mtr-u.5 for 11422870	mtr-u.5 for 25484764

Ortholog ID: 1199

Species

hvu

osa

sbi

bra

mtr

bna

sot

nta

Symbol

Function^*

nuclear transcription factor Y subunit B-1-like

nuclear transcription factor Y subunit B-1

nuclear transcription factor Y subunit B-5

nuclear transcription factor Y subunit B-1

nuclear transcription factor Y subunit B-5-like

nuclear transcription factor Y subunit B-1-like

nuclear transcription factor Y subunit B-5-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	4
osa00270	Cysteine and methionine metabolism	3
osa01230	Biosynthesis of amino acids	3
osa00670	One carbon pool by folate	3
osa00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr00970	Aminoacyl-tRNA biosynthesis	2
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	6
bna03460	Fanconi anemia pathway	3
bna00052	Galactose metabolism	2
bna00511	Other glycan degradation	2
bna00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

123440797

9266773

8062279

103858257

25481001

111214597

102587650

107783462

107782191

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 9266773 (osa-u.5 coexpression data)

Top 50 enrichment test to 9266773 (osa-u.5 coexpression data)


Species	osa	zma	mtr	bdi	bra	gma	ath	ppo	sbi	ghi	sot	nta	cre	tae	hvu	vvi	cit	bna	sly
Paralog	1	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 9266773 (osa-u.5 coexpression data)

Top 50 enrichment test to 9266773 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**