ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123443229	uncharacterized LOC123443229
hvu-r.1	123443915	peroxisomal biogenesis factor 6-like
hvu-r.1	123452037	peroxisomal biogenesis factor 6-like
tae-r.2	123078605	peroxisomal biogenesis factor 6
tae-r.2	123183286	peroxisomal biogenesis factor 6
tae-r.2	123060767	uncharacterized LOC123060767
bdi-r.1	100836955	cell division control protein 48 homolog C
bdi-r.1	100827769	putative cell division cycle ATPase
bdi-r.1	100831422	uncharacterized LOC100831422
osa-u.5	4339748	uncharacterized LOC4339748
osa-u.5	4326743	uncharacterized LOC4326743
osa-u.5	4326678	uncharacterized LOC4326678
zma-u.5	103649551	P-loop containing nucleoside triphosphate hydrolase superfamily protein
zma-u.5	103634999	P-loop containing nucleoside triphosphate hydrolase superfamily protein
zma-u.5	100383493	uncharacterized LOC100383493
sbi-r.1	8079294	uncharacterized LOC8079294
sbi-r.1	8081371	uncharacterized LOC8081371
ath-u.5	DAA1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AT5G52882	P-loop containing nucleoside triphosphate hydrolases superfamily protein
gma-u.5	100815589	spastin
gma-u.5	100783137	uncharacterized LOC100783137
gma-u.5	100804099	uncharacterized LOC100804099
sly-u.5	101244308	uncharacterized LOC101244308
sly-u.5	101260609	uncharacterized LOC101260609
bra-r.6	103857110	uncharacterized LOC103857110
bra-r.6	103844768	spastin
bra-r.6	103838137	putative cell division cycle ATPase
vvi-u.5	100247304	uncharacterized LOC100247304
vvi-u.5	100252698	cell division control protein 48
vvi-u.5	100257581	uncharacterized LOC100257581
ppo-u.5	18105639	peroxisome biosynthesis protein PAS1
ppo-u.5	7472734	cell division control protein 48 homolog C
ppo-u.5	7489792	uncharacterized LOC7489792
mtr-u.5	25495967	uncharacterized LOC25495967
mtr-u.5	25502128	uncharacterized LOC25502128
ghi-r.1	107951962	uncharacterized LOC107951962
ghi-r.1	107950630	uncharacterized LOC107950630
ghi-r.1	107944756	meiotic spindle formation protein mei-1
bna-r.1	106436849	fidgetin-like protein 1
bna-r.1	106366485	putative cell division cycle ATPase
sot-r.1	102606049	fidgetin-like protein 1
sot-r.1	102581738	uncharacterized LOC102581738
cit-r.1	102608904	uncharacterized LOC102608904
cit-r.1	102621068	hypothetical protein
nta-r.1	107761755	uncharacterized LOC107761755
nta-r.1	107821892	uncharacterized LOC107821892
nta-r.1	107824634	uncharacterized LOC107824634

Top 50 coexpressed genes to 123443229 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123443229 (hvu-r.1 coexpression data)

CoexMap"123443229"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005741 [list] [network] mitochondrial outer membrane

(39 genes)

IEA

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity	(576 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2546 genes)	IEA

Protein

XP_044975482.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 3, nucl 1, cyto 1, extr 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1

(predict for XP_044975482.1)

Subcellular
localization
TargetP

other 6

(predict for XP_044975482.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123443229	hvu-r.1 for 123443915	hvu-r.1 for 123452037	tae-r.2 for 123078605	tae-r.2 for 123183286	tae-r.2 for 123060767	bdi-r.1 for 100836955	bdi-r.1 for 100827769	bdi-r.1 for 100831422	osa-u.5 for 4339748	osa-u.5 for 4326743	osa-u.5 for 4326678	zma-u.5 for 103649551	zma-u.5 for 103634999	zma-u.5 for 100383493	sbi-r.1 for 8079294	sbi-r.1 for 8081371	ath-u.5 for DAA1	ath-u.5 for AT5G52882	gma-u.5 for 100815589	gma-u.5 for 100783137	gma-u.5 for 100804099	sly-u.5 for 101244308	sly-u.5 for 101260609	bra-r.6 for 103857110	bra-r.6 for 103844768	bra-r.6 for 103838137	vvi-u.5 for 100247304	vvi-u.5 for 100252698	vvi-u.5 for 100257581	ppo-u.5 for 18105639	ppo-u.5 for 7472734	ppo-u.5 for 7489792	mtr-u.5 for 25495967	mtr-u.5 for 25502128	ghi-r.1 for 107951962	ghi-r.1 for 107950630	ghi-r.1 for 107944756	bna-r.1 for 106436849	bna-r.1 for 106366485	sot-r.1 for 102606049	sot-r.1 for 102581738	cit-r.1 for 102608904	cit-r.1 for 102621068	nta-r.1 for 107761755	nta-r.1 for 107821892	nta-r.1 for 107824634

Ortholog

Ortholog ID: 1587

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

DAA1

Function^*

uncharacterized LOC123443229

peroxisomal biogenesis factor 6-like

uncharacterized LOC123060767

peroxisomal biogenesis factor 6

uncharacterized LOC123148586

cell division control protein 48 homolog C

putative cell division cycle ATPase

uncharacterized LOC100831422

uncharacterized LOC4339748

uncharacterized LOC4326743

uncharacterized LOC4326678

P-loop containing nucleoside triphosphate hydrolase superfamily protein

uncharacterized LOC100383493

uncharacterized LOC8079294

P-loop containing nucleoside triphosphate hydrolases superfamily protein

uncharacterized LOC100783137

uncharacterized LOC100804099

spastin

uncharacterized LOC101244308

uncharacterized LOC101260609

spastin

uncharacterized LOC100247304

cell division control protein 48

uncharacterized LOC100257581

peroxisome biosynthesis protein PAS1

uncharacterized LOC7489792

uncharacterized LOC25495967

uncharacterized LOC25502128

uncharacterized LOC107950630

meiotic spindle formation protein mei-1

putative cell division cycle ATPase

fidgetin-like protein 1

uncharacterized LOC102581738

uncharacterized LOC102608904

hypothetical protein

uncharacterized LOC107761755

uncharacterized LOC107821892

uncharacterized LOC107827486

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	3
hvu00020	Citrate cycle (TCA cycle)	2
hvu00270	Cysteine and methionine metabolism	2
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	6
tae00010	Glycolysis / Gluconeogenesis	3
tae00051	Fructose and mannose metabolism	3
tae00052	Galactose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae00905	Brassinosteroid biosynthesis	2
tae00010	Glycolysis / Gluconeogenesis	2
tae00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	5
osa01200	Carbon metabolism	5
osa01230	Biosynthesis of amino acids	4
osa00710	Carbon fixation by Calvin cycle	3
osa00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	6
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	3
sbi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00943	Isoflavonoid biosynthesis	5
gma00941	Flavonoid biosynthesis	3
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00010	Glycolysis / Gluconeogenesis	3
bra00051	Fructose and mannose metabolism	3
bra00052	Galactose metabolism	3
bra00500	Starch and sucrose metabolism	3
bra00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	4
ghi01230	Biosynthesis of amino acids	4
ghi00270	Cysteine and methionine metabolism	3
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot04016	MAPK signaling pathway - plant	2
sot00270	Cysteine and methionine metabolism	2
sot00460	Cyanoamino acid metabolism	2
sot00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	10
nta04075	Plant hormone signal transduction	8
nta00330	Arginine and proline metabolism	4

Expression

Expression pattern

Entrez Gene ID^*

123443229

123443915

123452037

123060767

123061528

123148586

100836955

100827769

100831422

4339748

4326743

4326678

103649551

103634999

100383493

8079294

842716

5008305

100783137

100804099

100817952

101244308

101260609

103844768

100247304

100252698

100257581

18105639

7489792

25495967

25502128

107950630

107944756

107890694

106366485

106390846

102606049

102581738

102608904

102621068

107761755

107821892

107827486

The preparation time of this page was 0.3 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	3	3	2	2	3	2	3	3	3	2	3	2	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123443229 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123443229 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**