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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123444647   uncharacterized LOC123444647 
 tae-r.2   123062350   uncharacterized LOC123062350 
 tae-r.2   123079487   uncharacterized LOC123079487 
 tae-r.2   123071125   uncharacterized LOC123071125 
 bdi-r.1   100831838   uncharacterized LOC100831838 
 osa-u.5   4351697   uncharacterized LOC4351697 
 zma-u.5   100279349   uncharacterized LOC100279349 
 sbi-r.1   8055266   uncharacterized LOC8055266 
 ath-u.5   AT5G12220   las1-like family protein 
 gma-u.5   100818525   uncharacterized LOC100818525 
 gma-u.5   100775513   uncharacterized LOC100775513 
 sly-u.5   101262228   uncharacterized LOC101262228 
 bra-r.6   103855960   uncharacterized LOC103855960 
 vvi-u.5   100263330   pre-rRNA-processing protein las1 
 ppo-u.5   7454880   uncharacterized LOC7454880 
 ppo-u.5   7463878   protein LAS1 
 mtr-u.5   11432339   pre-rRNA-processing protein las1 
 ghi-r.1   121223293   uncharacterized LOC121223293 
 ghi-r.1   107938582   uncharacterized LOC107938582 
 bna-r.1   106420218   uncharacterized LOC106420218 
 bna-r.1   125584071   uncharacterized LOC125584071 
 sot-r.1   102599960   uncharacterized LOC102599960 
 cit-r.1   102625692   uncharacterized LOC102625692 
 nta-r.1   107760939   uncharacterized LOC107760939 
 nta-r.1   107827832   uncharacterized LOC107827832 
 cre-r.1   CHLRE_01g002201v5   uncharacterized protein 

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Top 50 coexpressed genes to 123444647 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123444647 (hvu-r.1 coexpression data)

CoexMap"123444647"


hvuLOC123444647 | Entrez gene ID : 123444647    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 2 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000470 [list] [network] maturation of LSU-rRNA  (40 genes)  IEA  
GO:0000460 [list] [network] maturation of 5.8S rRNA  (56 genes)  IEA  
GO CC
GO:0090730 [list] [network] Las1 complex  (1 genes)  IEA  
GO:0030687 [list] [network] preribosome, large subunit precursor  (32 genes)  IEA  
GO MF
GO:0004519 [list] [network] endonuclease activity  (91 genes)  IEA  
Protein XP_044977372.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 2,  cysk_nucl 2,  chlo 2  (predict for XP_044977372.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_044977372.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123444647
tae-r.2
for
123062350
tae-r.2
for
123079487
tae-r.2
for
123071125
bdi-r.1
for
100831838
osa-u.5
for
4351697
zma-u.5
for
100279349
sbi-r.1
for
8055266
ath-u.5
for
AT5G12220
gma-u.5
for
100818525
gma-u.5
for
100775513
sly-u.5
for
101262228
bra-r.6
for
103855960
vvi-u.5
for
100263330
ppo-u.5
for
7454880
ppo-u.5
for
7463878
mtr-u.5
for
11432339
ghi-r.1
for
121223293
ghi-r.1
for
107938582
bna-r.1
for
106420218
bna-r.1
for
125584071
sot-r.1
for
102599960
cit-r.1
for
102625692
nta-r.1
for
107760939
nta-r.1
for
107827832
cre-r.1
for
CHLRE_01g002201v5


Ortholog ID: 9088
Species hvu tae tae tae bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123444647 LOC123062350 LOC123079487 LOC123071125 LOC100831838 LOC4351697 LOC100279349 LOC8055266 AT5G12220 LOC100818525 LOC100775513 LOC101262228 LOC103855960 LOC100263330 LOC7454880 LOC7463878 LOC11432339 LOC121223293 LOC107938582 LOC106420218 LOC125584071 LOC102599960 LOC102625692 LOC107760939 LOC107827832 CHLRE_01g002201v5
Function* uncharacterized LOC123444647 uncharacterized LOC123062350 uncharacterized LOC123079487 uncharacterized LOC123071125 uncharacterized LOC100831838 uncharacterized LOC4351697 uncharacterized LOC100279349 uncharacterized LOC8055266 las1-like family protein uncharacterized LOC100818525 uncharacterized LOC100775513 uncharacterized LOC101262228 uncharacterized LOC103855960 pre-rRNA-processing protein las1 uncharacterized LOC7454880 protein LAS1 pre-rRNA-processing protein las1 uncharacterized LOC121223293 uncharacterized LOC107938582 uncharacterized LOC106420218 uncharacterized LOC125584071 uncharacterized LOC102599960 uncharacterized LOC102625692 uncharacterized LOC107760939 uncharacterized LOC107827832 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123444647 123062350 123079487 123071125 100831838 4351697 100279349 8055266 831096 100818525 100775513 101262228 103855960 100263330 7454880 7463878 11432339 121223293 107938582 106420218 125584071 102599960 102625692 107760939 107827832 66051896
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