ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123445131	uncharacterized LOC123445131
osa-u.5	4324849	uncharacterized LOC4324849
osa-u.5	4344459	uncharacterized LOC4344459
zma-u.5	103650919	protein artemis
zma-u.5	103630466	uncharacterized LOC103630466
ath-u.5	AT1G19025	DNA repair metallo-beta-lactamase family protein
gma-u.5	100807948	5' exonuclease Apollo
sly-u.5	101250070	uncharacterized LOC101250070
vvi-u.5	100254013	uncharacterized LOC100254013
ppo-u.5	7466733	uncharacterized LOC7466733
mtr-u.5	11423063	5' exonuclease Apollo

functional annotation

KEGG

GO BP

GO:0031848 [list] [network] protection from non-homologous end joining at telomere	(5 genes)	IEA
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining	(13 genes)	IEA
GO:0036297 [list] [network] interstrand cross-link repair	(18 genes)	IEA

GO CC

GO MF

GO:0035312 [list] [network] 5'-3' DNA exonuclease activity	(9 genes)	IEA
GO:0003684 [list] [network] damaged DNA binding	(40 genes)	IEA

Protein

XP_044978006.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_044978006.1)

Subcellular
localization
TargetP

chlo 5, other 4

(predict for XP_044978006.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123445131	osa-u.5 for 4324849	osa-u.5 for 4344459	zma-u.5 for 103650919	zma-u.5 for 103630466	ath-u.5 for AT1G19025	gma-u.5 for 100807948	sly-u.5 for 101250070	vvi-u.5 for 100254013	ppo-u.5 for 7466733	mtr-u.5 for 11423063

Ortholog ID: 6703

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123445131

5' exonuclease Apollo

uncharacterized LOC100821385

uncharacterized LOC100844720

uncharacterized LOC4344459

uncharacterized LOC4324849

protein artemis

uncharacterized LOC103630466

protein artemis

DNA repair metallo-beta-lactamase family protein

5' exonuclease Apollo

uncharacterized LOC101250070

DNA cross-link repair 1A protein

uncharacterized LOC100254013

uncharacterized LOC7466733

5' exonuclease Apollo

uncharacterized LOC107959606

5' exonuclease Apollo

DNA cross-link repair 1A protein-like

5' exonuclease Apollo

uncharacterized LOC102608159

uncharacterized LOC107786558

uncharacterized LOC107823033

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03030	DNA replication	5
bdi03410	Base excision repair	2
bdi03420	Nucleotide excision repair	2
bdi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03030	DNA replication	6
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2
vvi04120	Ubiquitin mediated proteolysis	2
vvi01200	Carbon metabolism	2
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo00190	Oxidative phosphorylation	2
ppo04142	Lysosome	2
ppo04145	Phagosome	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00010	Glycolysis / Gluconeogenesis	2
sot00710	Carbon fixation by Calvin cycle	2
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2
cit00020	Citrate cycle (TCA cycle)	2
cit00785	Lipoic acid metabolism	2
cit01200	Carbon metabolism	2
cit01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	4
nta00073	Cutin, suberine and wax biosynthesis	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta00561	Glycerolipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123445131

123128913

123071825

100821385

100844720

4344459

4324849

103650919

103630466

8063135

838484

100807948

101250070

103842667

100254013

7466733

11423063

107959606

107961415

106369083

106368901

102606437

102608159

107786558

107823033

5715786

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123445131 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123445131 (hvu-r.1 coexpression data)


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123445131 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123445131 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**