ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123445416	uncharacterized LOC123445416
hvu-r.1	123440276	uncharacterized LOC123440276
tae-r.2	123053721	uncharacterized LOC123053721
tae-r.2	123063373	uncharacterized LOC123063373
tae-r.2	123072350	uncharacterized LOC123072350
bdi-r.1	100826938	uncharacterized LOC100826938
bdi-r.1	100845784	uncharacterized LOC100845784
bdi-r.1	100823449	uncharacterized LOC100823449
osa-u.5	4338601	uncharacterized LOC4338601
osa-u.5	4326504	uncharacterized LOC4326504
zma-u.5	100501523	zinc finger (C3HC4-type RING finger) family protein
zma-u.5	103636306	uncharacterized LOC103636306
sbi-r.1	8062293	uncharacterized LOC8062293
sbi-r.1	110431891	uncharacterized LOC110431891
sbi-r.1	8055825	uncharacterized LOC8055825
ath-u.5	AT3G10810	zinc finger (C3HC4-type RING finger) family protein
ath-u.5	AT3G56590	hydroxyproline-rich glycoprotein family protein
gma-u.5	100818532	uncharacterized LOC100818532
gma-u.5	100792490	uncharacterized LOC100792490
gma-u.5	100786981	uncharacterized LOC100786981
sly-u.5	101260385	vacuolar protein-sorting protein bro1-like
sly-u.5	101250645	uncharacterized LOC101250645
bra-r.6	103847296	protein transport protein SEC31
bra-r.6	103863097	uncharacterized LOC103863097
bra-r.6	103841561	uncharacterized LOC103841561
vvi-u.5	100248215	uncharacterized LOC100248215
ppo-u.5	7464054	uncharacterized LOC7464054
ppo-u.5	7479638	uncharacterized LOC7479638
mtr-u.5	11413293	uncharacterized LOC11413293
ghi-r.1	107925895	uncharacterized LOC107925895
ghi-r.1	121223511	uncharacterized LOC121223511
bna-r.1	125608082	uncharacterized LOC125608082
bna-r.1	106445226	uncharacterized LOC106445226
bna-r.1	106434584	protein transport protein SEC31
sot-r.1	102584778	uncharacterized LOC102584778
sot-r.1	102604829	uncharacterized LOC102604829
nta-r.1	107791868	uncharacterized LOC107791868
nta-r.1	107802853	uncharacterized LOC107802853
nta-r.1	107808132	uncharacterized LOC107808132

Top 50 coexpressed genes to 123445416 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123445416 (hvu-r.1 coexpression data)

CoexMap"123445416"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044978337.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 4, plas 3, cyto_plas 2, golg 1

(predict for XP_044978337.1)

Subcellular
localization
TargetP

other 9

(predict for XP_044978337.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123445416	hvu-r.1 for 123440276	tae-r.2 for 123053721	tae-r.2 for 123063373	tae-r.2 for 123072350	bdi-r.1 for 100826938	bdi-r.1 for 100845784	bdi-r.1 for 100823449	osa-u.5 for 4338601	osa-u.5 for 4326504	zma-u.5 for 100501523	zma-u.5 for 103636306	sbi-r.1 for 8062293	sbi-r.1 for 110431891	sbi-r.1 for 8055825	ath-u.5 for AT3G10810	ath-u.5 for AT3G56590	gma-u.5 for 100818532	gma-u.5 for 100792490	gma-u.5 for 100786981	sly-u.5 for 101260385	sly-u.5 for 101250645	bra-r.6 for 103847296	bra-r.6 for 103863097	bra-r.6 for 103841561	vvi-u.5 for 100248215	ppo-u.5 for 7464054	ppo-u.5 for 7479638	mtr-u.5 for 11413293	ghi-r.1 for 107925895	ghi-r.1 for 121223511	bna-r.1 for 125608082	bna-r.1 for 106445226	bna-r.1 for 106434584	sot-r.1 for 102584778	sot-r.1 for 102604829	nta-r.1 for 107791868	nta-r.1 for 107802853	nta-r.1 for 107808132

Ortholog

Ortholog ID: 3797

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

nta

Symbol

Function^*

uncharacterized LOC123445416

uncharacterized LOC123440276

uncharacterized LOC123063373

uncharacterized LOC123072350

uncharacterized LOC123130197

uncharacterized LOC100826938

uncharacterized LOC100845784

uncharacterized LOC100823449

uncharacterized LOC4338601

uncharacterized LOC4326504

zinc finger (C3HC4-type RING finger) family protein

uncharacterized LOC103636306

uncharacterized LOC8062293

uncharacterized LOC110431891

uncharacterized LOC8055825

zinc finger (C3HC4-type RING finger) family protein

hydroxyproline-rich glycoprotein family protein

uncharacterized LOC100818532

uncharacterized LOC100786981

uncharacterized LOC100819068

vacuolar protein-sorting protein bro1-like

uncharacterized LOC101250645

protein transport protein SEC31

uncharacterized LOC103863097

uncharacterized LOC103841561

uncharacterized LOC100248215

uncharacterized LOC7464054

uncharacterized LOC7479638

uncharacterized LOC11413293

uncharacterized LOC107925895

uncharacterized LOC121223511

protein transport protein SEC31

uncharacterized LOC106368072

protein transport protein SEC31-like

uncharacterized LOC102584778

uncharacterized LOC102604829

uncharacterized LOC107802853

uncharacterized LOC107808132

uncharacterized LOC107823363

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04145	Phagosome	2
hvu04517	IgSF CAM signaling	2
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03030	DNA replication	2
hvu03410	Base excision repair	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	3
bra00562	Inositol phosphate metabolism	2
bra04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00053	Ascorbate and aldarate metabolism	2
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01240	Biosynthesis of cofactors	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00460	Cyanoamino acid metabolism	2
nta00500	Starch and sucrose metabolism	2
nta00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00220	Arginine biosynthesis	2
nta00240	Pyrimidine metabolism	2
nta00250	Alanine, aspartate and glutamate metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

123445416

123440276

123063373

123072350

123130197

100826938

100845784

100823449

4338601

4326504

100501523

103636306

8062293

110431891

8055825

820250

824826

100818532

100786981

100819068

101260385

101250645

103847296

103863097

103841561

100248215

7464054

7479638

11413293

107925895

121223511

106434584

106368072

106418312

102584778

102604829

107802853

107808132

107823363

The preparation time of this page was 0.1 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	nta	cre	cit
Paralog	2	3	3	2	2	3	2	3	2	3	1	2	1	2	3	2	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123445416 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123445416 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**