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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123446826   beta-amylase 2, chloroplastic-like 
 tae-r.2   123090510   beta-amylase 2, chloroplastic 
 tae-r.2   123087407   beta-amylase 2, chloroplastic 
 tae-r.2   123095580   beta-amylase 2, chloroplastic 
 bdi-r.1   100834182   beta-amylase 2, chloroplastic-like 
 bdi-r.1   100824427   beta-amylase 2, chloroplastic 
 osa-u.5   4347903   beta-amylase 2, chloroplastic 
 zma-u.5   100278364   uncharacterized LOC100278364 
 sbi-r.1   8062554   beta-amylase 2, chloroplastic 
 ath-u.5   BAM7   beta-amylase 7 
 ath-u.5   BAM2   beta-amylase 2 
 gma-u.5   100812659   beta-amylase 7 
 gma-u.5   100805560   beta-amylase 7 
 sly-u.5   101248715   beta-amylase 7 
 bra-r.6   103866930   beta-amylase 7 
 bra-r.6   103836914   beta-amylase 2, chloroplastic 
 vvi-u.5   100255167   beta-amylase 2, chloroplastic 
 vvi-u.5   100246489   beta-amylase 7 
 ppo-u.5   7494080   beta-amylase 2, chloroplastic 
 ppo-u.5   7496966   beta-amylase 7-like 
 ppo-u.5   7461768   beta-amylase 7 
 mtr-u.5   25498898   beta-amylase 7 
 ghi-r.1   107911516   beta-amylase 7 
 ghi-r.1   107911517   beta-amylase 2, chloroplastic 
 ghi-r.1   107924511   beta-amylase 7 
 bna-r.1   106450941   beta-amylase 7 
 bna-r.1   106450876   beta-amylase 7-like 
 bna-r.1   106434958   beta-amylase 2, chloroplastic-like 
 sot-r.1   102593066   beta-amylase 7 
 cit-r.1   127901044   beta-amylase 2, chloroplastic-like 
 cit-r.1   127901035   beta-amylase 7-like 
 cit-r.1   102623122   beta-amylase 7 
 nta-r.1   107827210   beta-amylase 2, chloroplastic-like 
 nta-r.1   107804741   beta-amylase 7 
 nta-r.1   107791629   beta-amylase 7-like 

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Top 50 coexpressed genes to 123446826 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123446826 (hvu-r.1 coexpression data)

CoexMap"123446826"


hvuLOC123446826 | Entrez gene ID : 123446826    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 2 1 1 1 2 2 1 2 2 3 1 3 3 1 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg00500 [list] [network] Starch and sucrose metabolism (193 genes)
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (51 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (11 genes)  IEA  
Protein XP_044979303.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  mito 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_044979303.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044979303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123446826
tae-r.2
for
123090510
tae-r.2
for
123087407
tae-r.2
for
123095580
bdi-r.1
for
100834182
bdi-r.1
for
100824427
osa-u.5
for
4347903
zma-u.5
for
100278364
sbi-r.1
for
8062554
ath-u.5
for
BAM7
ath-u.5
for
BAM2
gma-u.5
for
100812659
gma-u.5
for
100805560
sly-u.5
for
101248715
bra-r.6
for
103866930
bra-r.6
for
103836914
vvi-u.5
for
100255167
vvi-u.5
for
100246489
ppo-u.5
for
7494080
ppo-u.5
for
7496966
ppo-u.5
for
7461768
mtr-u.5
for
25498898
ghi-r.1
for
107911516
ghi-r.1
for
107911517
ghi-r.1
for
107924511
bna-r.1
for
106450941
bna-r.1
for
106450876
bna-r.1
for
106434958
sot-r.1
for
102593066
cit-r.1
for
127901044
cit-r.1
for
127901035
cit-r.1
for
102623122
nta-r.1
for
107827210
nta-r.1
for
107804741
nta-r.1
for
107791629


Ortholog ID: 4708
Species hvu tae tae tae bdi bdi osa zma sbi ath ath gma gma sly bra bra vvi vvi ppo ppo ppo mtr ghi ghi ghi bna bna bna sot cit cit cit nta nta nta
Symbol LOC123446826 LOC123090510 LOC123087407 LOC123095580 LOC100834182 LOC100824427 LOC4347903 LOC100278364 LOC8062554 BAM7 BAM2 LOC100812659 LOC100805560 LOC101248715 LOC103866930 LOC103836914 LOC100255167 LOC100246489 LOC7494080 LOC7496966 LOC7461768 LOC25498898 LOC107911516 LOC107911517 LOC107924511 LOC106450876 LOC106434958 LOC106365522 LOC102593066 LOC127901044 LOC127901035 LOC102623122 LOC107827210 LOC107804741 LOC107791629
Function* beta-amylase 2, chloroplastic-like beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic-like beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic uncharacterized LOC100278364 beta-amylase 2, chloroplastic beta-amylase 7 beta-amylase 2 beta-amylase 7 beta-amylase 7 beta-amylase 7 beta-amylase 7 beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic beta-amylase 7 beta-amylase 2, chloroplastic beta-amylase 7-like beta-amylase 7 beta-amylase 7 beta-amylase 7 beta-amylase 2, chloroplastic beta-amylase 7 beta-amylase 7-like beta-amylase 2, chloroplastic-like beta-amylase 2, chloroplastic beta-amylase 7 beta-amylase 2, chloroplastic-like beta-amylase 7-like beta-amylase 7 beta-amylase 2, chloroplastic-like beta-amylase 7 beta-amylase 7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi00500 Starch and sucrose metabolism 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa00860 Porphyrin metabolism 2
osa00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04144 Endocytosis 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 8
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath01250 Biosynthesis of nucleotide sugars 3
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
ppo00052 Galactose metabolism 2
ppo00600 Sphingolipid metabolism 2
ppo00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo00500 Starch and sucrose metabolism 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03250 Viral life cycle - HIV-1 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00920 Sulfur metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit00900 Terpenoid backbone biosynthesis 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit04144 Endocytosis 2
cit00500 Starch and sucrose metabolism 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit04144 Endocytosis 2
cit00500 Starch and sucrose metabolism 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 3
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123446826 123090510 123087407 123095580 100834182 100824427 4347903 100278364 8062554 819196 827959 100812659 100805560 101248715 103866930 103836914 100255167 100246489 7494080 7496966 7461768 25498898 107911516 107911517 107924511 106450876 106434958 106365522 102593066 127901044 127901035 102623122 107827210 107804741 107791629
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