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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123448633   lysine-specific demethylase JMJ25-like 
 tae-r.2   123085844   lysine-specific demethylase JMJ25 
 tae-r.2   123097453   lysine-specific demethylase JMJ25 
 bdi-r.1   100839939   lysine-specific demethylase JMJ25 
 osa-u.5   4332818   E3 ubiquitin-protein ligase JMJ24 
 zma-u.5   103639146   lysine-specific demethylase JMJ25-like 
 sbi-r.1   8082299   lysine-specific demethylase JMJ25 
 ath-u.5   AT1G09060   JmjC domain protein JMJ24 
 gma-u.5   100801287   lysine-specific demethylase JMJ25 
 gma-u.5   100792166   lysine-specific demethylase JMJ25 
 sly-u.5   101261570   E3 ubiquitin-protein ligase JMJ24 
 bra-r.6   103836361   lysine-specific demethylase JMJ25 
 vvi-u.5   100249389   E3 ubiquitin-protein ligase JMJ24 
 ppo-u.5   18098686   E3 ubiquitin-protein ligase JMJ24 
 ppo-u.5   7473273   E3 ubiquitin-protein ligase JMJ24 
 mtr-u.5   11405620   lysine-specific demethylase JMJ25 
 ghi-r.1   107899094   lysine-specific demethylase JMJ25 
 ghi-r.1   107894236   lysine-specific demethylase JMJ25 
 bna-r.1   106362338   lysine-specific demethylase JMJ25-like 
 bna-r.1   106453173   lysine-specific demethylase JMJ25 
 sot-r.1   102579305   lysine-specific demethylase JMJ25 
 cit-r.1   102630420   E3 ubiquitin-protein ligase JMJ24 
 nta-r.1   107826305   E3 ubiquitin-protein ligase JMJ24 
 nta-r.1   107762636   E3 ubiquitin-protein ligase JMJ24 

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Top 50 coexpressed genes to 123448633 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123448633 (hvu-r.1 coexpression data)

CoexMap"123448633"


hvuLOC123448633 | Entrez gene ID : 123448633    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 1 1 1 1 2 1 1 1 2 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (404 genes)  IEA  
GO CC
GO:0000118 [list] [network] histone deacetylase complex  (27 genes)  IEA  
GO:0000785 [list] [network] chromatin  (307 genes)  IEA  
GO MF
GO:0032454 [list] [network] histone H3K9 demethylase activity  (8 genes)  IEA  
GO:0031490 [list] [network] chromatin DNA binding  (39 genes)  IEA  
GO:0003712 [list] [network] transcription coregulator activity  (138 genes)  IEA  
Protein XP_044981529.1 [sequence] [blastp]
XP_044981530.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  cysk 1,  cyto_nucl 1  (predict for XP_044981529.1)
chlo 5,  nucl 3,  cyto 1,  vacu 1,  cysk 1  (predict for XP_044981530.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_044981529.1)
other 5,  chlo 3  (predict for XP_044981530.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123448633
tae-r.2
for
123085844
tae-r.2
for
123097453
bdi-r.1
for
100839939
osa-u.5
for
4332818
zma-u.5
for
103639146
sbi-r.1
for
8082299
ath-u.5
for
AT1G09060
gma-u.5
for
100801287
gma-u.5
for
100792166
sly-u.5
for
101261570
bra-r.6
for
103836361
vvi-u.5
for
100249389
ppo-u.5
for
18098686
ppo-u.5
for
7473273
mtr-u.5
for
11405620
ghi-r.1
for
107899094
ghi-r.1
for
107894236
bna-r.1
for
106362338
bna-r.1
for
106453173
sot-r.1
for
102579305
cit-r.1
for
102630420
nta-r.1
for
107826305
nta-r.1
for
107762636


Ortholog ID: 11038
Species hvu tae tae bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123448633 LOC123085844 LOC123097453 LOC100839939 LOC4332818 LOC103639146 LOC8082299 AT1G09060 LOC100801287 LOC100792166 LOC101261570 LOC103836361 LOC100249389 LOC18098686 LOC7473273 LOC11405620 LOC107899094 LOC107894236 LOC106362338 LOC106453173 LOC102579305 LOC102630420 LOC107826305 LOC107762636
Function* lysine-specific demethylase JMJ25-like lysine-specific demethylase JMJ25 lysine-specific demethylase JMJ25 lysine-specific demethylase JMJ25 E3 ubiquitin-protein ligase JMJ24 lysine-specific demethylase JMJ25-like lysine-specific demethylase JMJ25 JmjC domain protein JMJ24 lysine-specific demethylase JMJ25 lysine-specific demethylase JMJ25 E3 ubiquitin-protein ligase JMJ24 lysine-specific demethylase JMJ25 E3 ubiquitin-protein ligase JMJ24 E3 ubiquitin-protein ligase JMJ24 E3 ubiquitin-protein ligase JMJ24 lysine-specific demethylase JMJ25 lysine-specific demethylase JMJ25 lysine-specific demethylase JMJ25 lysine-specific demethylase JMJ25-like lysine-specific demethylase JMJ25 lysine-specific demethylase JMJ25 E3 ubiquitin-protein ligase JMJ24 E3 ubiquitin-protein ligase JMJ24 E3 ubiquitin-protein ligase JMJ24
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
gma04144 Endocytosis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 3
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123448633 123085844 123097453 100839939 4332818 103639146 8082299 837427 100801287 100792166 101261570 103836361 100249389 18098686 7473273 11405620 107899094 107894236 106362338 106453173 102579305 102630420 107826305 107762636
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