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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123442792   glycine-rich protein 2-like 
 hvu-r.1   123442785   glycine-rich protein 2-like 
 hvu-r.1   123425052   cold shock-like protein CspC 
 tae-r.2   123131895   glycine-rich protein 2 
 tae-r.2   123056303   glycine-rich protein 2 
 bdi-r.1   100838449   glycine-rich protein 2 
 bdi-r.1   100837495   glycine-rich protein 2 
 bdi-r.1   100828678   glycine-rich protein 2 
 osa-u.5   4328119   glycine-rich protein 2 
 osa-u.5   4344581   glycine-rich protein 2 
 zma-u.5   100857032   Cold shock protein 2 
 zma-u.5   100285240   uncharacterized LOC100285240 
 sbi-r.1   8066848   glycine-rich protein 2 
 sbi-r.1   8068258   glycine-rich protein 2 
 ath-u.5   GRP2B   glycine-rich protein 2B 
 ath-u.5   GRP2   glycine rich protein 2 
 gma-u.5   100813178   cold shock protein 2 
 gma-u.5   100795875   glycine-rich protein 2 
 gma-u.5   100799708   cold shock protein 2 
 sly-u.5   101249407   glycine-rich protein 2-like 
 sly-u.5   101259298   glycine-rich protein 2-like 
 sly-u.5   101259590   glycine-rich protein 2 
 bra-r.6   103842561   cold shock protein 2 
 bra-r.6   103835399   cold shock protein 2 
 bra-r.6   103864242   cold shock domain-containing protein 4-like 
 vvi-u.5   100266087   cold shock protein 2 
 vvi-u.5   100259081   glycine-rich protein 2 
 vvi-u.5   100259004   glycine-rich protein 2 
 ppo-u.5   7470385   glycine-rich protein 2 
 ppo-u.5   7463174   glycine-rich protein 2 
 ppo-u.5   7469135   glycine-rich protein 2 
 mtr-u.5   112417509   cold shock domain-containing protein 3 
 ghi-r.1   107901396   cold shock protein 2 
 ghi-r.1   107908662   glycine-rich protein 2 
 bna-r.1   125607971   cold shock domain-containing protein 4-like 
 bna-r.1   106376897   cold shock domain-containing protein 4 
 bna-r.1   106358021   cold shock protein 2 
 sot-r.1   102596882   glycine-rich protein 2-like 
 sot-r.1   102589937   glycine-rich protein 2-like 
 sot-r.1   102590251   glycine-rich protein 2-like 
 cit-r.1   102616860   glycine-rich protein 2 
 cit-r.1   102613691   glycine-rich protein 2 
 nta-r.1   107810166   cold shock protein 2 
 nta-r.1   107832840   glycine-rich protein 2 
 nta-r.1   107816435   glycine-rich protein 2-like 
 cre-r.1   CHLRE_06g268600v5   uncharacterized protein 

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Top 50 coexpressed genes to 123442792 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123442792 (hvu-r.1 coexpression data)

CoexMap"123450400"


hvuLOC123450400 | Entrez gene ID : 123450400    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 2 3 2 2 2 2 3 3 3 3 3 1 2 3 3 2 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (708 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3739 genes)  IEA  
Protein XP_044983611.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  mito 2,  extr 1,  cyto_nucl 1  (predict for XP_044983611.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for XP_044983611.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123442792
hvu-r.1
for
123442785
hvu-r.1
for
123425052
tae-r.2
for
123131895
tae-r.2
for
123056303
bdi-r.1
for
100838449
bdi-r.1
for
100837495
bdi-r.1
for
100828678
osa-u.5
for
4328119
osa-u.5
for
4344581
zma-u.5
for
100857032
zma-u.5
for
100285240
sbi-r.1
for
8066848
sbi-r.1
for
8068258
ath-u.5
for
GRP2B
ath-u.5
for
GRP2
gma-u.5
for
100813178
gma-u.5
for
100795875
gma-u.5
for
100799708
sly-u.5
for
101249407
sly-u.5
for
101259298
sly-u.5
for
101259590
bra-r.6
for
103842561
bra-r.6
for
103835399
bra-r.6
for
103864242
vvi-u.5
for
100266087
vvi-u.5
for
100259081
vvi-u.5
for
100259004
ppo-u.5
for
7470385
ppo-u.5
for
7463174
ppo-u.5
for
7469135
mtr-u.5
for
112417509
ghi-r.1
for
107901396
ghi-r.1
for
107908662
bna-r.1
for
125607971
bna-r.1
for
106376897
bna-r.1
for
106358021
sot-r.1
for
102596882
sot-r.1
for
102589937
sot-r.1
for
102590251
cit-r.1
for
102616860
cit-r.1
for
102613691
nta-r.1
for
107810166
nta-r.1
for
107832840
nta-r.1
for
107816435
cre-r.1
for
CHLRE_06g268600v5


Ortholog ID: 1335
Species hvu hvu tae tae bdi bdi osa osa zma zma sbi sbi ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC123442785 LOC123425052 LOC542810 LOC542791 LOC100838449 LOC100828678 LOC4328119 LOC4344581 LOC100857032 LOC100285240 LOC8066848 LOC8068258 GRP2B GRP2 LOC100813178 LOC100815731 LOC106796585 LOC101249407 LOC101259298 LOC101259590 LOC103842561 LOC103835399 LOC103829064 LOC100266087 LOC100259081 LOC100259004 LOC7470385 LOC7463174 LOC7469135 LOC112417509 LOC107908662 LOC107916639 LOC107927849 LOC125607971 LOC106358021 LOC106368804 LOC102596882 LOC102589937 LOC102590251 LOC102616860 LOC102613691 LOC107810166 LOC107832840 LOC107832297 CHLRE_06g268600v5
Function* glycine-rich protein 2-like cold shock-like protein CspC glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 Cold shock protein 2 uncharacterized LOC100285240 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2B glycine rich protein 2 cold shock protein 2 glycine-rich protein 2 cold shock domain-containing protein 3 glycine-rich protein 2-like glycine-rich protein 2-like glycine-rich protein 2 cold shock protein 2 cold shock protein 2 cold shock protein 2 cold shock protein 2 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 cold shock domain-containing protein 3 glycine-rich protein 2 glycine-rich protein 2 glycine-rich protein 2 cold shock domain-containing protein 4-like cold shock protein 2 cold shock protein 2-like glycine-rich protein 2-like glycine-rich protein 2-like glycine-rich protein 2-like glycine-rich protein 2 glycine-rich protein 2 cold shock protein 2 glycine-rich protein 2 cold shock protein 2-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa00190 Oxidative phosphorylation 5
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03040 Spliceosome 3
zma00100 Steroid biosynthesis 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi00030 Pentose phosphate pathway 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma04626 Plant-pathogen interaction 4
gma03040 Spliceosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00052 Galactose metabolism 2
ppo00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 7
cre00195 Photosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123442785 123425052 542810 542791 100838449 100828678 4328119 4344581 100857032 100285240 8066848 8068258 816641 830024 100813178 100815731 106796585 101249407 101259298 101259590 103842561 103835399 103829064 100266087 100259081 100259004 7470385 7463174 7469135 112417509 107908662 107916639 107927849 125607971 106358021 106368804 102596882 102589937 102590251 102616860 102613691 107810166 107832840 107832297 5721889
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