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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125576636   methyl-CpG-binding domain protein 4-like protein 
 ath-u.5   AT3G07930   DNA glycosylase superfamily protein 
 gma-u.5   102666145   uncharacterized LOC102666145 
 gma-u.5   100793802   uncharacterized LOC100793802 
 vvi-u.5   100244192   methyl-CpG-binding domain protein 4-like protein 
 ppo-u.5   7463420   methyl-CpG-binding domain protein 4-like protein 
 ppo-u.5   18105441   methyl-CpG-binding domain protein 4-like protein 
 ppo-u.5   18105443   methyl-CpG-binding domain protein 4-like protein 
 mtr-u.5   25479887   methyl-CpG-binding domain protein 4-like protein 
 mtr-u.5   25479885   methyl-CpG-binding domain protein 4-like protein 
 sly-u.5   101255935   methyl-CpG-binding domain protein 4-like protein 
 osa-u.5   4346365   uncharacterized LOC4346365 
 zma-u.5   103629127   Methyl-CpG-binding domain protein 4-like protein 

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Top 50 coexpressed genes to 125576636 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125576636 (bna-r.1 coexpression data)

CoexMap"125576636"


bnaLOC125576636 | Entrez gene ID : 125576636    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 3 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006281 [list] [network] DNA repair  (1192 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (26025 genes)  IEA  
Protein XP_048593092.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_048593092.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_048593092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125576636
ath-u.5
for
AT3G07930
gma-u.5
for
102666145
gma-u.5
for
100793802
vvi-u.5
for
100244192
ppo-u.5
for
7463420
ppo-u.5
for
18105441
ppo-u.5
for
18105443
mtr-u.5
for
25479887
mtr-u.5
for
25479885
sly-u.5
for
101255935
osa-u.5
for
4346365
zma-u.5
for
103629127


Ortholog ID: 7199
Species bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta osa zma tae tae hvu sbi sbi bdi cre
Symbol LOC125576636 LOC106376420 LOC103848313 AT3G07930 LOC107888474 LOC107931354 LOC102607342 LOC102666145 LOC100793802 LOC100244192 LOC7454029 LOC18105441 LOC25479885 LOC25479887 LOC101255935 LOC102596231 LOC142180380 LOC4346365 LOC103629127 LOC123119151 LOC123119160 LOC123404642 LOC8059657 LOC8059659 LOC100825070 CHLRE_05g234250v5
Function* methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein DNA glycosylase superfamily protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein uncharacterized LOC102666145 uncharacterized LOC100793802 methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein methyl-CpG-binding domain protein 4-like protein uncharacterized LOC142180380 uncharacterized LOC4346365 Methyl-CpG-binding domain protein 4-like protein uncharacterized LOC123119151 uncharacterized LOC123119160 titin uncharacterized LOC8059657 serine/arginine repetitive matrix protein 1 uncharacterized LOC100825070 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03022 Basal transcription factors 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03022 Basal transcription factors 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00760 Nicotinate and nicotinamide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 2
tae00760 Nicotinate and nicotinamide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125576636 106376420 103848313 819984 107888474 107931354 102607342 102666145 100793802 100244192 7454029 18105441 25479885 25479887 101255935 102596231 142180380 4346365 103629127 123119151 123119160 123404642 8059657 8059659 100825070 5727746
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