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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125578596   mRNA export factor GLE1-like 
 ath-u.5   GLE1   nucleoporin GLE1-like protein 
 gma-u.5   100802744   protein GLE1 
 vvi-u.5   100245667   mRNA export factor GLE1 
 ppo-u.5   7480949   mRNA export factor GLE1 
 mtr-u.5   11414779   protein GLE1 
 sly-u.5   101248103   mRNA export factor GLE1 
 osa-u.5   4329863   mRNA export factor GLE1 
 zma-u.5   103644232   protein GLE1 
 zma-u.5   103625787   protein GLE1 

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Top 50 coexpressed genes to 125578596 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125578596 (bna-r.1 coexpression data)

CoexMap"125578596"


bnaLOC125578596 | Entrez gene ID : 125578596    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
bna03015 [list] [network] mRNA surveillance pathway (420 genes)
GO BP
GO:0006449 [list] [network] regulation of translational termination  (14 genes)  IEA  
GO:0006446 [list] [network] regulation of translational initiation  (25 genes)  IEA  
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (32 genes)  IEA  
GO CC
GO:0044614 [list] [network] nuclear pore cytoplasmic filaments  (12 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (143 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0000822 [list] [network] inositol hexakisphosphate binding  (53 genes)  IEA  
GO:0031369 [list] [network] translation initiation factor binding  (54 genes)  IEA  
GO:0005543 [list] [network] phospholipid binding  (369 genes)  IEA  
Protein XP_048597737.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1,  plas 1  (predict for XP_048597737.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_048597737.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125578596

.
ath-u.5
for
GLE1

.
gma-u.5
for
100802744

.
vvi-u.5
for
100245667

.
ppo-u.5
for
7480949

.
mtr-u.5
for
11414779

.
sly-u.5
for
101248103

.
osa-u.5
for
4329863

.
zma-u.5
for
103644232

.
zma-u.5
for
103625787

.


Ortholog ID: 6599
Species ath gma sly osa zma zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol GLE1 LOC100802744 LOC101248103 LOC4329863 LOC103625787 LOC103644232 LOC103843077 LOC100245667 LOC7480949 LOC11414779 LOC123127596 LOC123401227 LOC107898649 LOC107933406 LOC125578596 LOC106411747 CHLRE_06g300900v5 LOC8061421 LOC102586428 LOC102623856 LOC100832549 LOC100844247 LOC107770120 LOC107790159
Function* nucleoporin GLE1-like protein protein GLE1 mRNA export factor GLE1 mRNA export factor GLE1 protein GLE1 protein GLE1 protein GLE1 mRNA export factor GLE1 mRNA export factor GLE1 protein GLE1 protein GLE1 protein GLE1-like protein GLE1 protein GLE1 mRNA export factor GLE1-like mRNA export factor GLE1-like uncharacterized protein protein GLE1 protein GLE1 mRNA export factor GLE1 protein GLE1 protein GLE1 mRNA export factor GLE1 mRNA export factor GLE1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 2
ath03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
zma03008 Ribosome biogenesis in eukaryotes 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra04120 Ubiquitin mediated proteolysis 3
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03015 mRNA surveillance pathway 3
hvu03082 ATP-dependent chromatin remodeling 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03013 Nucleocytoplasmic transport 2
sbi04136 Autophagy - other 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta00790 Folate biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837869 100802744 101248103 4329863 103625787 103644232 103843077 100245667 7480949 11414779 123127596 123401227 107898649 107933406 125578596 106411747 5716970 8061421 102586428 102623856 100832549 100844247 107770120 107790159
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