ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	125587548	ATPase family AAA domain-containing protein 3-A-like
bna-r.1	106436886	uncharacterized LOC106436886
bna-r.1	106442781	ATPase family AAA domain-containing protein 3C-like
bna-r.1	106449863	ATPase family AAA domain-containing protein 3C
bra-r.6	103867193	ATPase family AAA domain-containing protein 3C
bra-r.6	103844011	ATPase family AAA domain-containing protein 3
bra-r.6	103837852	ATPase family AAA domain-containing protein 3
ath-u.5	AT2G18330	AAA-type ATPase family protein
ath-u.5	AT3G03060	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AT4G36580	AAA-type ATPase family protein
ghi-r.1	107940259	ATPase family AAA domain-containing protein 3-B
ghi-r.1	107913078	ATPase family AAA domain-containing protein 3C
ghi-r.1	107909058	ATPase family AAA domain-containing protein 3-B
cit-r.1	102614551	uncharacterized LOC102614551
cit-r.1	102630694	uncharacterized LOC102630694
gma-u.5	100788478	ATPase family AAA domain-containing protein 3-B
gma-u.5	100777755	ATPase family AAA domain-containing protein 3
gma-u.5	100776095	ATPase family AAA domain-containing protein 3-B
vvi-u.5	100263248	uncharacterized LOC100263248
vvi-u.5	100266545	uncharacterized LOC100266545
ppo-u.5	7454982	uncharacterized LOC7454982
ppo-u.5	7480131	uncharacterized LOC7480131
ppo-u.5	7480374	uncharacterized LOC7480374
mtr-u.5	11438794	ATPase family AAA domain-containing protein 3C
mtr-u.5	11415700	ATPase family AAA domain-containing protein 3C
mtr-u.5	11425323	ATPase family AAA domain-containing protein 3
sly-u.5	101249619	AAA-type ATPase family protein
sly-u.5	101266596	uncharacterized LOC101266596
sot-r.1	102578202	ATPase family AAA domain-containing protein 3C
sot-r.1	102580732	ATPase family AAA domain-containing protein 3-like
nta-r.1	107793735	uncharacterized LOC107793735
nta-r.1	107818318	uncharacterized LOC107818318
nta-r.1	107797189	uncharacterized LOC107797189
osa-u.5	4330409	uncharacterized LOC4330409
osa-u.5	4330465	uncharacterized LOC4330465
zma-u.5	100194134	uncharacterized LOC100194134
zma-u.5	100501892	P-loop containing nucleoside triphosphate hydrolase superfamily protein
zma-u.5	103653966	ATPase family AAA domain-containing protein 3C
tae-r.2	123137930	ATPase family AAA domain-containing protein 3C
tae-r.2	123128138	ATPase family AAA domain-containing protein 3C
tae-r.2	123128076	ATPase family AAA domain-containing protein 3-B
hvu-r.1	123406023	ATPase family AAA domain-containing protein 3C-like
hvu-r.1	123404817	ATPase family AAA domain-containing protein 3-B-like
sbi-r.1	8073856	ATPase family AAA domain-containing protein 3
sbi-r.1	8073880	ATPase family AAA domain-containing protein 3-A
bdi-r.1	100837079	ATPase family AAA domain-containing protein 3C
bdi-r.1	100823773	ATPase family AAA domain-containing protein 3C
cre-r.1	CHLRE_03g144967v5	uncharacterized protein

Top 50 coexpressed genes to 125587548 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 125587548 (bna-r.1 coexpression data)

CoexMap"125587548"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007005 [list] [network] mitochondrion organization

(298 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(1831 genes)

IEA

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity	(1360 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(3493 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5995 genes)	IEA

Protein

XP_048614224.1 [sequence] [blastp]
XP_048614225.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, golg 2, vacu 1, nucl 1, mito 1, E.R. 1	(predict for XP_048614224.1)
chlo 4, mito 2, extr 2, E.R. 1	(predict for XP_048614225.1)

Subcellular
localization
TargetP

chlo 8, scret 3	(predict for XP_048614224.1)
chlo 8, scret 3	(predict for XP_048614225.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125587548	bna-r.1 for 106436886	bna-r.1 for 106442781	bna-r.1 for 106449863	bra-r.6 for 103867193	bra-r.6 for 103844011	bra-r.6 for 103837852	ath-u.5 for AT2G18330	ath-u.5 for AT3G03060	ath-u.5 for AT4G36580	ghi-r.1 for 107940259	ghi-r.1 for 107913078	ghi-r.1 for 107909058	cit-r.1 for 102614551	cit-r.1 for 102630694	gma-u.5 for 100788478	gma-u.5 for 100777755	gma-u.5 for 100776095	vvi-u.5 for 100263248	vvi-u.5 for 100266545	ppo-u.5 for 7454982	ppo-u.5 for 7480131	ppo-u.5 for 7480374	mtr-u.5 for 11438794	mtr-u.5 for 11415700	mtr-u.5 for 11425323	sly-u.5 for 101249619	sly-u.5 for 101266596	sot-r.1 for 102578202	sot-r.1 for 102580732	nta-r.1 for 107793735	nta-r.1 for 107818318	nta-r.1 for 107797189	osa-u.5 for 4330409	osa-u.5 for 4330465	zma-u.5 for 100194134	zma-u.5 for 100501892	zma-u.5 for 103653966	tae-r.2 for 123137930	tae-r.2 for 123128138	tae-r.2 for 123128076	hvu-r.1 for 123406023	hvu-r.1 for 123404817	sbi-r.1 for 8073856	sbi-r.1 for 8073880	bdi-r.1 for 100837079	bdi-r.1 for 100823773	cre-r.1 for CHLRE_03g144967v5

Ortholog

Ortholog ID: 1906

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC106436886

ATPase family AAA domain-containing protein 3C-like

ATPase family AAA domain-containing protein 3-B

ATPase family AAA domain-containing protein 3C

ATPase family AAA domain-containing protein 3-A

ATPase family AAA domain-containing protein 3-B

P-loop containing nucleoside triphosphate hydrolases superfamily protein

AAA-type ATPase family protein

ATPase family AAA domain-containing protein 3-B

ATPase family AAA domain-containing protein 3C

uncharacterized LOC102614551

uncharacterized LOC102630694

ATPase family AAA domain-containing protein 3

ATPase family AAA domain-containing protein 3-B

uncharacterized LOC100263248

uncharacterized LOC100266545

uncharacterized LOC7454982

uncharacterized LOC7480131

uncharacterized LOC7480374

ATPase family AAA domain-containing protein 3C

ATPase family AAA domain-containing protein 3

AAA-type ATPase family protein

uncharacterized LOC101266596

ATPase family AAA domain-containing protein 3C

ATPase family AAA domain-containing protein 3-like

uncharacterized LOC107793735

uncharacterized LOC107818318

uncharacterized LOC107777704

uncharacterized LOC4330409

uncharacterized LOC4330465

uncharacterized LOC100194134

ATPase family AAA domain-containing protein 3C

uncharacterized LOC103627618

ATPase family AAA domain-containing protein 3-B

ATPase family AAA domain-containing protein 3C

ATPase family AAA domain-containing protein 3C-like

ATPase family AAA domain-containing protein 3-B-like

ATPase family AAA domain-containing protein 3

ATPase family AAA domain-containing protein 3-A

ATPase family AAA domain-containing protein 3C

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2
bna00190	Oxidative phosphorylation	2
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03060	Protein export	2
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	4
osa03008	Ribosome biogenesis in eukaryotes	3
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00710	Carbon fixation by Calvin cycle	2
hvu01200	Carbon metabolism	2
hvu01230	Biosynthesis of amino acids	2
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03018	RNA degradation	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	2
bdi01240	Biosynthesis of cofactors	2
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	2

Expression

Expression pattern

Entrez Gene ID^*

106436886

106442781

106354436

103867193

103855127

103851077

821146

829810

831556

107940259

107913078

107901343

102614551

102630694

100777755

100776095

100790915

100263248

100266545

7454982

7480131

7480374

11438794

11415700

11425323

101249619

101266596

102578202

102580732

107793735

107818318

107777704

4330409

4330465

100194134

103653966

103627618

123128076

123137865

123145226

123406023

123404817

8073856

8073880

100837079

100823773

5721283

The preparation time of this page was 1.9 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	3	2	3	3	2	2	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125587548 (bna-r.1 coexpression data)

Top 50 enrichment test to 125587548 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**