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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125587605   mediator of RNA polymerase II transcription subunit 11-like 
 ath-u.5   AT3G01435   uncharacterized protein 
 gma-u.5   100306257   uncharacterized LOC100306257 
 gma-u.5   100792126   mediator of RNA polymerase II transcription subunit 11 
 vvi-u.5   100255926   mediator of RNA polymerase II transcription subunit 11 
 ppo-u.5   18097318   mediator of RNA polymerase II transcription subunit 11 
 mtr-u.5   11414265   mediator of RNA polymerase II transcription subunit 11 
 mtr-u.5   11413700   mediator of RNA polymerase II transcription subunit 11 
 sly-u.5   101262909   mediator of RNA polymerase II transcription subunit 11 
 osa-u.5   4330605   mediator of RNA polymerase II transcription subunit 11 
 osa-u.5   4328559   mediator of RNA polymerase II transcription subunit 11 
 zma-u.5   100279588   uncharacterized LOC100279588 
 zma-u.5   100277150   Mediator of RNA polymerase II transcription subunit 11 

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Top 50 coexpressed genes to 125587605 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125587605 (bna-r.1 coexpression data)

CoexMap"125587605"


bnaLOC125587605 | Entrez gene ID : 125587605    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (379 genes)  IEA  
Protein XP_048614341.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for XP_048614341.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_048614341.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125587605
ath-u.5
for
AT3G01435
gma-u.5
for
100306257
gma-u.5
for
100792126
vvi-u.5
for
100255926
ppo-u.5
for
18097318
mtr-u.5
for
11414265
mtr-u.5
for
11413700
sly-u.5
for
101262909
osa-u.5
for
4330605
osa-u.5
for
4328559
zma-u.5
for
100279588
zma-u.5
for
100277150


Ortholog ID: 5919
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi
Symbol LOC106434321 LOC106433429 LOC103870980 LOC103850069 AT3G01435 LOC107961942 LOC107910070 LOC102607294 LOC100792126 LOC100306257 LOC100255926 LOC18097318 LOC11413700 LOC11414265 LOC101262909 LOC102599143 LOC107773720 LOC107785314 LOC4330605 LOC4328559 LOC100279588 LOC100277150 LOC123161097 LOC123136813 LOC123403385 LOC123426023 LOC8079437 LOC8077657 LOC100831854
Function* mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 uncharacterized protein mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 uncharacterized LOC100306257 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 uncharacterized LOC100279588 Mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 4
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
gma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03018 RNA degradation 2
gma03010 Ribosome 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 6
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03050 Proteasome 4
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
bdi03040 Spliceosome 4
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106434321 106433429 103870980 103850069 2745869 107961942 107910070 102607294 100792126 100306257 100255926 18097318 11413700 11414265 101262909 102599143 107773720 107785314 4330605 4328559 100279588 100277150 123161097 123136813 123403385 123426023 8079437 8077657 100831854
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