Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125587865   polyribonucleotide nucleotidyltransferase 1, chloroplastic-like 
 ath-u.5   RIF10   polyribonucleotide nucleotidyltransferase 
 gma-u.5   100819741   polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 gma-u.5   100785430   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 vvi-u.5   100265692   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 ppo-u.5   7491063   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 ppo-u.5   7482382   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 mtr-u.5   11438450   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 sly-u.5   101245783   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 osa-u.5   4342497   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 
 zma-u.5   103631988   probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 

close


Top 50 coexpressed genes to 125587865 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 125587865 (bna-r.1 coexpression data)

CoexMap"125587865"


bnaLOC125587865 | Entrez gene ID : 125587865    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03018 [list] [network] RNA degradation (380 genes)
GO BP
GO:0000958 [list] [network] mitochondrial mRNA catabolic process  (11 genes)  IEA  
GO:0000965 [list] [network] mitochondrial RNA 3'-end processing  (19 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (365 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1831 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3196 genes)  IEA  
GO MF
GO:0004654 [list] [network] polyribonucleotide nucleotidyltransferase activity  (11 genes)  IEA  
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (96 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_048615100.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_048615100.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048615100.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125587865

.
ath-u.5
for
RIF10

.
gma-u.5
for
100819741

.
gma-u.5
for
100785430

.
vvi-u.5
for
100265692

.
ppo-u.5
for
7491063

.
ppo-u.5
for
7482382

.
mtr-u.5
for
11438450

.
sly-u.5
for
101245783

.
osa-u.5
for
4342497

.
zma-u.5
for
103631988

.


Ortholog ID: 7577
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol RIF10 LOC100785430 LOC100819741 LOC101245783 LOC4342497 LOC103631988 LOC103859008 LOC103855181 LOC100265692 LOC7482382 LOC7491063 LOC11438450 LOC123188625 LOC123044832 LOC123426165 LOC107913610 LOC107891187 LOC106438964 LOC125587865 CHLRE_04g214501v5 LOC8060701 LOC102599047 LOC102615727 LOC100824934 LOC107808053 LOC107782252
Function* polyribonucleotide nucleotidyltransferase probable polyribonucleotide nucleotidyltransferase 1, chloroplastic polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic polyribonucleotide nucleotidyltransferase 1, chloroplastic polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic polyribonucleotide nucleotidyltransferase 1, chloroplastic-like polyribonucleotide nucleotidyltransferase 1, chloroplastic-like uncharacterized protein probable polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic polyribonucleotide nucleotidyltransferase 1, chloroplastic probable polyribonucleotide nucleotidyltransferase 1, chloroplastic putative polyribonucleotide nucleotidyltransferase 1, chloroplastic putative polyribonucleotide nucleotidyltransferase 1, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo03010 Ribosome 3
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
tae00270 Cysteine and methionine metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
cre01232 Nucleotide metabolism 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot00230 Purine metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04146 Peroxisome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04146 Peroxisome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821181 100785430 100819741 101245783 4342497 103631988 103859008 103855181 100265692 7482382 7491063 11438450 123188625 123044832 123426165 107913610 107891187 106438964 125587865 5724232 8060701 102599047 102615727 100824934 107808053 107782252
The preparation time of this page was 0.1 [sec].