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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ROPGEF11   rop guanine nucleotide exchange factor-like protein 
 ghi-r.1   107906525   rop guanine nucleotide exchange factor 12 
 ghi-r.1   107933017   rho guanine nucleotide exchange factor 8 
 cit-r.1   102616233   rop guanine nucleotide exchange factor 12 
 gma-u.5   100781787   rop guanine nucleotide exchange factor 12 
 gma-u.5   100787455   rho guanine nucleotide exchange factor 8 
 gma-u.5   100778231   rho guanine nucleotide exchange factor 8 
 vvi-u.5   100261758   rho guanine nucleotide exchange factor 8 
 vvi-u.5   100260990   rho guanine nucleotide exchange factor 8 
 mtr-u.5   11442005   rop guanine nucleotide exchange factor 12 
 mtr-u.5   25491404   rop guanine nucleotide exchange factor 12 
 sly-u.5   101248400   rop guanine nucleotide exchange factor 12 
 sly-u.5   101251652   rop guanine nucleotide exchange factor 9 
 sly-u.5   101268846   pollen-specific kinase partner protein-like protein 
 sot-r.1   102584199   rop guanine nucleotide exchange factor 12-like 
 sot-r.1   102600973   rop guanine nucleotide exchange factor 12 
 nta-r.1   107778855   rho guanine nucleotide exchange factor 8-like 
 nta-r.1   107783577   rop guanine nucleotide exchange factor 12 
 osa-u.5   4325619   rop guanine nucleotide exchange factor 11 
 osa-u.5   4339594   rop guanine nucleotide exchange factor 9 
 osa-u.5   4325510   rop guanine nucleotide exchange factor 9 
 zma-u.5   100281770   pollen-specific kinase partner protein 
 zma-u.5   103626931   rop guanine nucleotide exchange factor 10 
 zma-u.5   103651184   rop guanine nucleotide exchange factor 9 
 tae-r.2   123058589   rop guanine nucleotide exchange factor 9 
 tae-r.2   123061900   rho guanine nucleotide exchange factor 8 
 bdi-r.1   100836854   rop guanine nucleotide exchange factor 9 
 bdi-r.1   100829485   rop guanine nucleotide exchange factor 9 

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Top 50 coexpressed genes to ROPGEF11 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ROPGEF11 (ath-u.5 coexpression data)

CoexMap"125588732"


bnaLOC125588732 | Entrez gene ID : 125588732    
Species ath ghi cit gma vvi mtr sly sot nta osa zma tae bdi bna ppo cre sbi bra hvu
Paralog 1 2 1 3 2 2 3 2 2 3 3 2 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (118 genes)  IEA  
Protein XP_048616417.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_048616417.1)
Subcellular
localization
TargetP
other 7  (predict for XP_048616417.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
ROPGEF11
ghi-r.1
for
107906525
ghi-r.1
for
107933017
cit-r.1
for
102616233
gma-u.5
for
100781787
gma-u.5
for
100787455
gma-u.5
for
100778231
vvi-u.5
for
100261758
vvi-u.5
for
100260990
mtr-u.5
for
11442005
mtr-u.5
for
25491404
sly-u.5
for
101248400
sly-u.5
for
101251652
sly-u.5
for
101268846
sot-r.1
for
102584199
sot-r.1
for
102600973
nta-r.1
for
107778855
nta-r.1
for
107783577
osa-u.5
for
4325619
osa-u.5
for
4339594
osa-u.5
for
4325510
zma-u.5
for
100281770
zma-u.5
for
103626931
zma-u.5
for
103651184
tae-r.2
for
123058589
tae-r.2
for
123061900
bdi-r.1
for
100836854
bdi-r.1
for
100829485


Ortholog ID: 905
Species ath ghi ghi ghi cit gma gma gma vvi vvi mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae bdi bdi
Symbol ROPGEF12 LOC107933017 LOC107949595 LOC107952141 LOC102616233 LOC100777496 LOC112998793 LOC100812078 LOC100261758 LOC100260990 LOC11442005 LOC25491404 LOC101251652 KPP LOC102584199 LOC102600973 LOC107778855 LOC107820833 LOC107805255 LOC4339594 LOC4325510 LOC4328986 LOC103651184 LOC100274290 LOC100216854 LOC123065602 LOC100836854 LOC100829485
Function* RHO guanyl-nucleotide exchange factor 12 rho guanine nucleotide exchange factor 8 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rho guanine nucleotide exchange factor 8 rho guanine nucleotide exchange factor 8 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 9 pollen-specific kinase partner protein rop guanine nucleotide exchange factor 12-like rop guanine nucleotide exchange factor 12 rho guanine nucleotide exchange factor 8-like rop guanine nucleotide exchange factor 12-like rho guanine nucleotide exchange factor 8 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 10 rop guanine nucleotide exchange factor 9 uncharacterized LOC100274290 uncharacterized LOC100216854 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 8
sot00941 Flavonoid biosynthesis 4
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 4
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844325 107933017 107949595 107952141 102616233 100777496 112998793 100812078 100261758 100260990 11442005 25491404 101251652 778332 102584199 102600973 107778855 107820833 107805255 4339594 4325510 4328986 103651184 100274290 100216854 123065602 100836854 100829485
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