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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125594094   ubiquitin carboxyl-terminal hydrolase 
 ath-u.5   UCH1   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 ath-u.5   UCH2   Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 
 gma-u.5   100802014   ubiquitin carboxyl-terminal hydrolase 2 
 gma-u.5   100792356   ubiquitin carboxyl-terminal hydrolase 2 
 vvi-u.5   100251772   ubiquitin carboxyl-terminal hydrolase isozyme L5-like 
 ppo-u.5   7495939   ubiquitin carboxyl-terminal hydrolase 2 
 ppo-u.5   7472566   ubiquitin carboxyl-terminal hydrolase 2 
 mtr-u.5   25484600   ubiquitin carboxyl-terminal hydrolase 2 
 sly-u.5   101250723   ubiquitin carboxyl-terminal hydrolase 2 
 osa-u.5   4328506   ubiquitin carboxyl-terminal hydrolase 2 
 osa-u.5   4331185   ubiquitin carboxyl-terminal hydrolase 2 
 zma-u.5   103653253   ubiquitin carboxyl-terminal hydrolase 2 
 zma-u.5   100382000   uncharacterized LOC100382000 
 zma-u.5   100191319   uncharacterized LOC100191319 

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Top 50 coexpressed genes to 125594094 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125594094 (bna-r.1 coexpression data)

CoexMap"125594094"


bnaLOC125594094 | Entrez gene ID : 125594094    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 1 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03082 [list] [network] ATP-dependent chromatin remodeling (198 genes)
GO BP
GO:0016579 [list] [network] protein deubiquitination  (243 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (910 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (192 genes)  IEA  
Protein XP_048626371.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_048626371.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048626371.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125594094

.
ath-u.5
for
UCH1

.
ath-u.5
for
UCH2

.
gma-u.5
for
100802014

.
gma-u.5
for
100792356

.
vvi-u.5
for
100251772

.
ppo-u.5
for
7495939

.
ppo-u.5
for
7472566

.
mtr-u.5
for
25484600

.
sly-u.5
for
101250723

.
osa-u.5
for
4328506

.
osa-u.5
for
4331185

.
zma-u.5
for
103653253

.
zma-u.5
for
100382000

.
zma-u.5
for
100191319

.


Ortholog ID: 3974
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol UCH1 UCH2 LOC100792356 LOC100802014 LOC101250723 LOC4328506 LOC4331185 LOC100382000 LOC100191319 LOC103831062 LOC117132575 LOC100251772 LOC7495939 LOC7472566 LOC25484600 LOC123136552 LOC123132481 LOC123452690 LOC123403131 LOC107949487 LOC107951863 LOC106433025 LOC125594120 CHLRE_06g253300v5 LOC8085256 LOC110434951 LOC102599895 LOC102614060 LOC100842241 LOC100821010 LOC142170787 LOC107828186
Function* Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 uncharacterized LOC100382000 uncharacterized LOC100191319 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase isozyme L5-like ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase-like uncharacterized protein ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase isozyme L5 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2 ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 6
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 9
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03050 Proteasome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae03082 ATP-dependent chromatin remodeling 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
cre03040 Spliceosome 3
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03018 RNA degradation 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot04626 Plant-pathogen interaction 2
sot03082 ATP-dependent chromatin remodeling 2
sot03030 DNA replication 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
bdi00780 Biotin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta03050 Proteasome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta03082 ATP-dependent chromatin remodeling 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831492 842876 100792356 100802014 101250723 4328506 4331185 100382000 100191319 103831062 117132575 100251772 7495939 7472566 25484600 123136552 123132481 123452690 123403131 107949487 107951863 106433025 125594120 5722155 8085256 110434951 102599895 102614060 100842241 100821010 142170787 107828186
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