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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125594129   floral homeotic protein APETALA 2-like 
 bna-r.1   106347473   AP2-like ethylene-responsive transcription factor TOE2 
 bna-r.1   106348248   floral homeotic protein APETALA 2 
 bra-r.6   103841411   AP2-like ethylene-responsive transcription factor SMZ 
 bra-r.6   103845425   AP2-like ethylene-responsive transcription factor TOE2 
 bra-r.6   103851522   AP2-like ethylene-responsive transcription factor TOE2 
 ath-u.5   AP2   Integrase-type DNA-binding superfamily protein 
 ath-u.5   TOE2   target of early activation tagged (EAT) 2 
 ath-u.5   SMZ   Integrase-type DNA-binding superfamily protein 
 ghi-r.1   107959062   ethylene-responsive transcription factor RAP2-7 
 ghi-r.1   107905271   APETALA2-like protein 3 
 ghi-r.1   107898078   floral homeotic protein APETALA 2 
 cit-r.1   102621126   floral homeotic protein APETALA 2-like 
 cit-r.1   102621401   APETALA2-like protein 2 
 cit-r.1   102606994   ethylene-responsive transcription factor RAP2-7 
 gma-u.5   100794096   floral homeotic protein APETALA 2 
 gma-u.5   100796271   ethylene-responsive transcription factor RAP2-7 
 gma-u.5   100792442   floral homeotic protein APETALA 2 
 vvi-u.5   AP2   transcription factor APETALA2 
 vvi-u.5   100263240   AP2-like ethylene-responsive transcription factor TOE3 
 vvi-u.5   100246815   ethylene-responsive transcription factor RAP2-7 
 ppo-u.5   7462600   floral homeotic protein APETALA 2 
 ppo-u.5   7469774   APETALA2-like protein 3 
 ppo-u.5   7489618   APETALA2-like protein 3 
 mtr-u.5   11425769   APETALA2-like protein 2 
 mtr-u.5   25493474   floral homeotic protein APETALA 2 
 mtr-u.5   11417561   AP2-like ethylene-responsive transcription factor TOE3 
 sly-u.5   101252772   ethylene-responsive transcription factor RAP2-7-like 
 sly-u.5   101259280   ethylene-responsive transcription factor RAP2-7-like 
 sly-u.5   AP2a   APETALA2a 
 sot-r.1   102582568   floral homeotic protein APETALA 2 
 sot-r.1   102589826   AP2-like ethylene-responsive transcription factor TOE3 
 sot-r.1   102605336   ethylene-responsive transcription factor RAP2-7-like 
 nta-r.1   107778909   AP2-like ethylene-responsive transcription factor TOE3 
 osa-u.5   9271266   ethylene-responsive transcription factor RAP2-7 
 osa-u.5   9269072   AP2-like ethylene-responsive transcription factor TOE3 
 osa-u.5   4337654   AP2-like ethylene-responsive transcription factor TOE3 
 zma-u.5   103635944   APETALA2-like protein 1 
 zma-u.5   103629196   AP2-like ethylene-responsive transcription factor TOE3 
 zma-u.5   100381947   uncharacterized LOC100381947 
 tae-r.2   543360   APETALA2-like protein 2 
 tae-r.2   543013   APETALA2-like protein 1 
 tae-r.2   123123462   APETALA2-like protein 2 
 hvu-r.1   123428148   APETALA2-like protein 5 
 hvu-r.1   123409793   APETALA2-like protein 4 
 hvu-r.1   123403691   APETALA2-like protein 1 
 sbi-r.1   8068364   ethylene-responsive transcription factor RAP2-7 
 sbi-r.1   8068151   ethylene-responsive transcription factor RAP2-7 
 sbi-r.1   8079577   AP2-like ethylene-responsive transcription factor TOE3 
 bdi-r.1   100839861   floral homeotic protein APETALA 2 
 bdi-r.1   100834763   AP2-like ethylene-responsive transcription factor TOE3 
 bdi-r.1   100831490   floral homeotic protein APETALA 2 
 cre-r.1   CHLRE_08g383000v5   uncharacterized protein 
 cre-r.1   CHLRE_08g385350v5   uncharacterized protein 
 cre-r.1   CHLRE_01g009575v5   uncharacterized protein 

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Top 50 coexpressed genes to 125594129 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125594129 (bna-r.1 coexpression data)

CoexMap"125594129"


bnaLOC125594129 | Entrez gene ID : 125594129    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 3 3 3 3 3 3 3 1 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_048626402.1 [sequence] [blastp]
XP_048626403.1 [sequence] [blastp]
XP_048626404.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_048626402.1)
nucl 10  (predict for XP_048626403.1)
nucl 9  (predict for XP_048626404.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048626402.1)
other 8  (predict for XP_048626403.1)
other 8  (predict for XP_048626404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125594129
bna-r.1
for
106347473
bna-r.1
for
106348248
bra-r.6
for
103841411
bra-r.6
for
103845425
bra-r.6
for
103851522
ath-u.5
for
AP2
ath-u.5
for
TOE2
ath-u.5
for
SMZ
ghi-r.1
for
107959062
ghi-r.1
for
107905271
ghi-r.1
for
107898078
cit-r.1
for
102621126
cit-r.1
for
102621401
cit-r.1
for
102606994
gma-u.5
for
100794096
gma-u.5
for
100796271
gma-u.5
for
100792442
vvi-u.5
for
AP2
vvi-u.5
for
100263240
vvi-u.5
for
100246815
ppo-u.5
for
7462600
ppo-u.5
for
7469774
ppo-u.5
for
7489618
mtr-u.5
for
11425769
mtr-u.5
for
25493474
mtr-u.5
for
11417561
sly-u.5
for
101252772
sly-u.5
for
101259280
sly-u.5
for
AP2a
sot-r.1
for
102582568
sot-r.1
for
102589826
sot-r.1
for
102605336
nta-r.1
for
107778909
osa-u.5
for
9271266
osa-u.5
for
9269072
osa-u.5
for
4337654
zma-u.5
for
103635944
zma-u.5
for
103629196
zma-u.5
for
100381947
tae-r.2
for
543360
tae-r.2
for
543013
tae-r.2
for
123123462
hvu-r.1
for
123428148
hvu-r.1
for
123409793
hvu-r.1
for
123403691
sbi-r.1
for
8068364
sbi-r.1
for
8068151
sbi-r.1
for
8079577
bdi-r.1
for
100839861
bdi-r.1
for
100834763
bdi-r.1
for
100831490
cre-r.1
for
CHLRE_08g383000v5
cre-r.1
for
CHLRE_08g385350v5
cre-r.1
for
CHLRE_01g009575v5


Ortholog ID: 395
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC125594129 LOC106423299 LOC106366778 LOC103845425 LOC103851522 LOC103829531 TOE2 SMZ SNZ LOC107959062 LOC107931690 LOC107913226 LOC102606994 LOC102627474 LOC102622542 LOC100797238 LOC100788303 LOC100808212 AP2 LOC100246815 LOC7489618 LOC18100239 LOC7465291 LOC11417561 LOC11407832 LOC11406478 LOC101259280 AP2c AP2e LOC102582568 LOC102605336 LOC102579807 LOC107764494 LOC107803429 LOC107810888 LOC9269072 LOC4342787 LOC100280414 LOC100271892 LOC732805 LOC543013 LOC123123462 LOC123428148 LOC123409793 LOC123453013 LOC8068364 LOC8068151 LOC8057377 LOC100839861 LOC100831490 LOC100825522 CHLRE_08g383000v5 CHLRE_01g009575v5 CHLRE_01g009650v5
Function* floral homeotic protein APETALA 2-like floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 AP2-like ethylene-responsive transcription factor TOE2 AP2-like ethylene-responsive transcription factor TOE2 AP2-like ethylene-responsive transcription factor TOE3 target of early activation tagged (EAT) 2 Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 AP2-like ethylene-responsive transcription factor TOE3 floral homeotic protein APETALA 2 APETALA2-like protein 3 ethylene-responsive transcription factor RAP2-7 APETALA2-like protein 3 transcription factor APETALA2 ethylene-responsive transcription factor RAP2-7 APETALA2-like protein 3 APETALA2-like protein 3 APETALA2-like protein 3 AP2-like ethylene-responsive transcription factor TOE3 floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7 ethylene-responsive transcription factor RAP2-7-like APETALA2-like protein AP2c APETALA2-like protein AP2e floral homeotic protein APETALA 2 ethylene-responsive transcription factor RAP2-7-like ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 AP2-like ethylene-responsive transcription factor TOE3 AP2-like ethylene-responsive transcription factor TOE3 APETALA2-like protein 3 uncharacterized LOC100280414 sister of indeterminate spikelet 1 glossy15 APETALA2-like protein 1 APETALA2-like protein 2 APETALA2-like protein 5 APETALA2-like protein 4 APETALA2-like protein 2 ethylene-responsive transcription factor RAP2-7 ethylene-responsive transcription factor RAP2-7 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 floral homeotic protein APETALA 2 AP2/ERF and B3 domain-containing transcription factor ARF14-like uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 9
ghi01320 Sulfur cycle 7
ghi00230 Purine metabolism 4
ghi00261 Monobactam biosynthesis 4
ghi00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
cit00620 Pyruvate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 5
cit04146 Peroxisome 3
cit00071 Fatty acid degradation 2
cit01040 Biosynthesis of unsaturated fatty acids 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00640 Propanoate metabolism 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
sly00908 Zeatin biosynthesis 3
sly00996 Biosynthesis of various alkaloids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 2
sot03010 Ribosome 2
sot00785 Lipoic acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 4
zma00500 Starch and sucrose metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125594129 106423299 106366778 103845425 103851522 103829531 836134 824664 818510 107959062 107931690 107913226 102606994 102627474 102622542 100797238 100788303 100808212 100268051 100246815 7489618 18100239 7465291 11417561 11407832 11406478 101259280 100736534 100736535 102582568 102605336 102579807 107764494 107803429 107810888 9269072 4342787 100280414 100271892 732805 543013 123123462 123428148 123409793 123453013 8068364 8068151 8057377 100839861 100831490 100825522 5719829 5725844 5725812
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