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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125594535   nuclear pore complex protein NUP93B-like 
 ath-u.5   AT2G41620   Nucleoporin interacting component (Nup93/Nic96-like) family protein 
 ath-u.5   AT3G57350   Nucleoporin interacting component (Nup93/Nic96-like) family protein 
 gma-u.5   100782831   nuclear pore complex protein NUP93A 
 gma-u.5   100777660   nuclear pore complex protein NUP93A 
 vvi-u.5   100252000   nuclear pore complex protein NUP93A 
 ppo-u.5   7485204   nuclear pore complex protein NUP93A 
 ppo-u.5   7457766   nuclear pore complex protein NUP93A 
 mtr-u.5   11427202   nuclear pore complex protein NUP93A 
 sly-u.5   101262406   nuclear pore complex protein NUP93A 
 osa-u.5   4332834   nuclear pore complex protein NUP93A 
 zma-u.5   103634826   nuclear pore complex protein NUP93A 

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Top 50 coexpressed genes to 125594535 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125594535 (bna-r.1 coexpression data)

CoexMap"125594535"


bnaLOC125594535 | Entrez gene ID : 125594535    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
GO BP
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (32 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (145 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (143 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (60 genes)  IEA  
Protein XP_048626659.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  E.R. 1,  cysk_nucl 1,  cyto_pero 1  (predict for XP_048626659.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_048626659.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125594535

.
ath-u.5
for
AT2G41620

.
ath-u.5
for
AT3G57350

.
gma-u.5
for
100782831

.
gma-u.5
for
100777660

.
vvi-u.5
for
100252000

.
ppo-u.5
for
7485204

.
ppo-u.5
for
7457766

.
mtr-u.5
for
11427202

.
sly-u.5
for
101262406

.
osa-u.5
for
4332834

.
zma-u.5
for
103634826

.


Ortholog ID: 6844
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT3G57350 AT2G41620 LOC100777660 LOC100782831 LOC101262406 LOC4332834 LOC103634826 LOC103865894 LOC103841640 LOC100252000 LOC7485204 LOC7457766 LOC11427202 LOC123085866 LOC123097273 LOC123399829 LOC107925888 LOC107940523 LOC106415407 LOC106451577 CHLRE_17g717800v5 LOC8082655 LOC102591270 LOC102579640 LOC102630722 LOC100836281 LOC107832412 LOC107795313
Function* Nucleoporin interacting component (Nup93/Nic96-like) family protein Nucleoporin interacting component (Nup93/Nic96-like) family protein nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93B nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A-like nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93B-like nuclear pore complex protein NUP93B uncharacterized protein nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A-like nuclear pore complex protein NUP93B-like nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 6
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03040 Spliceosome 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 5
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 8
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna04120 Ubiquitin mediated proteolysis 4
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 8
bna03020 RNA polymerase 6
bna03013 Nucleocytoplasmic transport 3
bna00020 Citrate cycle (TCA cycle) 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
sbi03013 Nucleocytoplasmic transport 4
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 5
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03015 mRNA surveillance pathway 2
sot01240 Biosynthesis of cofactors 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03013 Nucleocytoplasmic transport 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 6
nta00620 Pyruvate metabolism 6
nta01200 Carbon metabolism 6
nta01230 Biosynthesis of amino acids 6
nta04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 6
nta00620 Pyruvate metabolism 6
nta01200 Carbon metabolism 6
nta01230 Biosynthesis of amino acids 6
nta04145 Phagosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824902 818760 100777660 100782831 101262406 4332834 103634826 103865894 103841640 100252000 7485204 7457766 11427202 123085866 123097273 123399829 107925888 107940523 106415407 106451577 5729287 8082655 102591270 102579640 102630722 100836281 107832412 107795313
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