ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	125596098	DIS3-like exonuclease 2
ath-u.5	AT1G77680	Ribonuclease II/R family protein
gma-u.5	100817387	DIS3-like exonuclease 2
gma-u.5	100815252	DIS3-like exonuclease 2
vvi-u.5	100260740	DIS3-like exonuclease 2
ppo-u.5	7495102	DIS3-like exonuclease 2
ppo-u.5	7460941	DIS3-like exonuclease 2
mtr-u.5	11436030	DIS3-like exonuclease 2
sly-u.5	101253650	DIS3-like exonuclease 2
osa-u.5	4330762	DIS3-like exonuclease 2
zma-u.5	103654245	DIS3-like exonuclease 2

functional annotation

KEGG

GO BP

GO CC

GO:0000178 [list] [network] exosome (RNase complex)	(51 genes)	IEA
GO:0000932 [list] [network] P-body	(160 genes)	IEA

GO MF

GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity	(96 genes)	IEA
GO:0003723 [list] [network] RNA binding	(3852 genes)	IEA

Protein

XP_048627342.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, chlo 1, mito 1, cysk 1, chlo_mito 1

(predict for XP_048627342.1)

Subcellular
localization
TargetP

other 5

(predict for XP_048627342.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125596098	ath-u.5 for AT1G77680	gma-u.5 for 100817387	gma-u.5 for 100815252	vvi-u.5 for 100260740	ppo-u.5 for 7495102	ppo-u.5 for 7460941	mtr-u.5 for 11436030	sly-u.5 for 101253650	osa-u.5 for 4330762	zma-u.5 for 103654245

Ortholog ID: 9299

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

DIS3-like exonuclease 2

Ribonuclease II/R family protein

DIS3-like exonuclease 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2
bna00730	Thiamine metabolism	2
bna01240	Biosynthesis of cofactors	2
bna00330	Arginine and proline metabolism	2
bna00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00730	Thiamine metabolism	2
bna01240	Biosynthesis of cofactors	2
bna00330	Arginine and proline metabolism	2
bna00410	beta-Alanine metabolism	2
bna00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00330	Arginine and proline metabolism	2
ath00410	beta-Alanine metabolism	2
ath00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03022	Basal transcription factors	2
cit03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2
ppo04144	Endocytosis	2
ppo05100	Bacterial invasion of epithelial cells	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	4

Expression

Expression pattern

Entrez Gene ID^*

106397721

106401350

103853088

844104

107904990

107923942

102619579

100815252

100817387

100260740

7460941

7495102

11436030

101253650

102589561

107794328

107781049

4330762

103654245

123138355

123145596

123401284

8066219

100839011

5718807

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 125596098 (bna-r.1 coexpression data)

Top 50 enrichment test to 125596098 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125596098 (bna-r.1 coexpression data)

Top 50 enrichment test to 125596098 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**