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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125597756   proteasome subunit beta type-2-A-like 
 ath-u.5   PBD1   20S proteasome beta subunit D1 
 ath-u.5   PBD2   20S proteasome beta subunit D2 
 gma-u.5   100499738   proteasome subunit beta type-2 
 gma-u.5   100306158   uncharacterized LOC100306158 
 vvi-u.5   100852565   proteasome subunit beta type-2-A 
 ppo-u.5   18101569   proteasome subunit beta type-2-A 
 ppo-u.5   7498066   proteasome subunit beta type-2-A 
 mtr-u.5   11422291   proteasome subunit beta type-2-A 
 mtr-u.5   11443159   proteasome subunit beta type-2-B 
 mtr-u.5   11436484   proteasome subunit beta type-2-B 
 sly-u.5   101249580   proteasome subunit beta type-2-B 
 osa-u.5   4333803   proteasome subunit beta type-2-like 
 zma-u.5   100282105   uncharacterized LOC100282105 
 zma-u.5   100282158   uncharacterized LOC100282158 

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Top 50 coexpressed genes to 125597756 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125597756 (bna-r.1 coexpression data)

CoexMap"125597756"


bnaLOC125597756 | Entrez gene ID : 125597756    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 1 2 3 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03050 [list] [network] Proteasome (219 genes)
GO BP
GO:0010498 [list] [network] proteasomal protein catabolic process  (528 genes)  IEA  
GO CC
GO:0019774 [list] [network] proteasome core complex, beta-subunit complex  (27 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (94 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3196 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0008233 [list] [network] peptidase activity  (2038 genes)  IEA  
Protein XP_048628250.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 8,  cyto 2  (predict for XP_048628250.1)
Subcellular
localization
TargetP
scret 7,  other 4  (predict for XP_048628250.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125597756

.
ath-u.5
for
PBD1

.
ath-u.5
for
PBD2

.
gma-u.5
for
100499738

.
gma-u.5
for
100306158

.
vvi-u.5
for
100852565

.
ppo-u.5
for
18101569

.
ppo-u.5
for
7498066

.
mtr-u.5
for
11422291

.
mtr-u.5
for
11443159

.
mtr-u.5
for
11436484

.
sly-u.5
for
101249580

.
osa-u.5
for
4333803

.
zma-u.5
for
100282105

.
zma-u.5
for
100282158

.


Ortholog ID: 3583
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PBD1 PBD2 LOC100499738 LOC100306158 LOC101249580 LOC4333803 LOC100282158 LOC100282105 LOC103869021 LOC103868009 LOC100852565 LOC18101569 LOC7498066 LOC11422291 LOC11436484 LOC123087191 LOC543169 LOC123447267 LOC107928600 LOC121214784 LOC125591553 LOC106365197 CHLRE_14g610950v5 LOC8062956 LOC102598896 LOC102616535 LOC100827540 LOC107776568 LOC107794572
Function* 20S proteasome beta subunit D1 20S proteasome beta subunit D2 proteasome subunit beta type-2 uncharacterized LOC100306158 proteasome subunit beta type-2-B proteasome subunit beta type-2-like uncharacterized LOC100282158 uncharacterized LOC100282105 proteasome subunit beta type-2-A proteasome subunit beta type-2-A-like proteasome subunit beta type-2-A proteasome subunit beta type-2-A proteasome subunit beta type-2-A proteasome subunit beta type-2-A proteasome subunit beta type-2-B proteasome subunit beta type-2 proteasome subunit beta type-2 proteasome subunit beta type-2 proteasome subunit beta type-2-A proteasome subunit beta type-2-B proteasome subunit beta type-2-A-like proteasome subunit beta type-2-A-like uncharacterized protein proteasome subunit beta type-2 proteasome subunit beta type-2-B proteasome subunit beta type-2-A proteasome subunit beta type-2 proteasome subunit beta type-2-A proteasome subunit beta type-2-A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 14
gma00780 Biotin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 16
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 13
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 15
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 15
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 16
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 12
hvu00020 Citrate cycle (TCA cycle) 2
hvu00190 Oxidative phosphorylation 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 17
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna03082 ATP-dependent chromatin remodeling 4
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03083 Polycomb repressive complex 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 13
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 12
nta00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821834 827135 100499738 100306158 101249580 4333803 100282158 100282105 103869021 103868009 100852565 18101569 7498066 11422291 11436484 123087191 543169 123447267 107928600 121214784 125591553 106365197 5724572 8062956 102598896 102616535 100827540 107776568 107794572
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