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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125601293   phosphoribosylaminoimidazole carboxylase, chloroplastic-like 
 ath-u.5   AT2G37690   phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase 
 gma-u.5   100812377   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 gma-u.5   100787182   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 vvi-u.5   100250122   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ppo-u.5   18108079   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ppo-u.5   7487686   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 mtr-u.5   11405596   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 sly-u.5   101255944   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 osa-u.5   4327345   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 zma-u.5   103630165   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 zma-u.5   100501865   phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein 

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Top 50 coexpressed genes to 125601293 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125601293 (bna-r.1 coexpression data)

CoexMap"125601293"


bnaLOC125601293 | Entrez gene ID : 125601293    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00230 [list] [network] Purine metabolism (284 genes)
GO BP
GO:0006189 [list] [network] 'de novo' IMP biosynthetic process  (27 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
GO:0004638 [list] [network] phosphoribosylaminoimidazole carboxylase activity  (5 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (6718 genes)  IEA  
Protein XP_048629515.1 [sequence] [blastp]
XP_048629516.1 [sequence] [blastp]
XP_048629517.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_048629515.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_048629516.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_048629517.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_048629515.1)
chlo 7  (predict for XP_048629516.1)
chlo 7  (predict for XP_048629517.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125601293

.
ath-u.5
for
AT2G37690

.
gma-u.5
for
100812377

.
gma-u.5
for
100787182

.
vvi-u.5
for
100250122

.
ppo-u.5
for
18108079

.
ppo-u.5
for
7487686

.
mtr-u.5
for
11405596

.
sly-u.5
for
101255944

.
osa-u.5
for
4327345

.
zma-u.5
for
103630165

.
zma-u.5
for
100501865

.


Ortholog ID: 6516
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G37690 LOC100812377 LOC100787182 LOC101255944 LOC4327345 LOC103630165 LOC100501865 LOC103865624 LOC103857728 LOC100250122 LOC18108079 LOC7487686 LOC11405596 LOC123069188 LOC123077712 LOC123443117 LOC107949056 LOC121225607 LOC125601293 LOC106392916 CHLRE_12g503300v5 LOC8084329 LOC102597319 LOC102626933 LOC100840405 LOC107783264 LOC107826110
Function* phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic-like phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic-like phosphoribosylaminoimidazole carboxylase, chloroplastic uncharacterized protein phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic-like phosphoribosylaminoimidazole carboxylase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath00230 Purine metabolism 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00500 Starch and sucrose metabolism 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 3
sly00670 One carbon pool by folate 2
sly01230 Biosynthesis of amino acids 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 8
zma01240 Biosynthesis of cofactors 3
zma03440 Homologous recombination 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 9
zma01240 Biosynthesis of cofactors 4
zma01232 Nucleotide metabolism 3
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra01240 Biosynthesis of cofactors 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 5
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01240 Biosynthesis of cofactors 3
bra01232 Nucleotide metabolism 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo00230 Purine metabolism 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 5
mtr01230 Biosynthesis of amino acids 4
mtr00230 Purine metabolism 3
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr00240 Pyrimidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 11
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 8
tae03018 RNA degradation 2
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi01230 Biosynthesis of amino acids 3
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00620 Pyruvate metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 6
cre00220 Arginine biosynthesis 4
cre01230 Biosynthesis of amino acids 4
cre01240 Biosynthesis of cofactors 4
cre01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04145 Phagosome 3
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 4
bdi03010 Ribosome 3
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta00230 Purine metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818346 100812377 100787182 101255944 4327345 103630165 100501865 103865624 103857728 100250122 18108079 7487686 11405596 123069188 123077712 123443117 107949056 121225607 125601293 106392916 5716425 8084329 102597319 102626933 100840405 107783264 107826110
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