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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   NF-YA4   nuclear factor Y, subunit A4 
 ath-u.5   NF-YA7   nuclear factor Y, subunit A7 
 gma-u.5   NF-YA16   nuclear transcription factor Y subunit A-16 
 gma-u.5   100499754   putative CCAAT-binding transcription factor 
 gma-u.5   NF-YA08   nuclear transcription factor Y subunit A-8 
 vvi-u.5   100249692   nuclear transcription factor Y subunit A-7 
 ppo-u.5   7487567   nuclear transcription factor Y subunit A-7 
 ppo-u.5   18103293   nuclear transcription factor Y subunit A-7 
 mtr-u.5   11413865   nuclear transcription factor Y subunit A-7 
 sly-u.5   101260988   nuclear transcription factor Y subunit A-7 
 osa-u.5   4352778   nuclear transcription factor Y subunit A-7 
 osa-u.5   4344874   nuclear transcription factor Y subunit A-4 
 zma-u.5   100383246   uncharacterized LOC100383246 
 zma-u.5   100284857   uncharacterized LOC100284857 
 zma-u.5   100194365   uncharacterized LOC100194365 

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Top 50 coexpressed genes to NF-YA4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NF-YA4 (ath-u.5 coexpression data)

CoexMap"125601980"


bnaLOC125601980 | Entrez gene ID : 125601980    
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 1 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (71 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (792 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (968 genes)  IEA  
Protein XP_048629875.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  extr 1  (predict for XP_048629875.1)
Subcellular
localization
TargetP
other 7  (predict for XP_048629875.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
NF-YA4

.
ath-u.5
for
NF-YA7

.
gma-u.5
for
NF-YA16

.
gma-u.5
for
100499754

.
gma-u.5
for
NF-YA08

.
vvi-u.5
for
100249692

.
ppo-u.5
for
7487567

.
ppo-u.5
for
18103293

.
mtr-u.5
for
11413865

.
sly-u.5
for
101260988

.
osa-u.5
for
4352778

.
osa-u.5
for
4344874

.
zma-u.5
for
100383246

.
zma-u.5
for
100284857

.
zma-u.5
for
100194365

.


Ortholog ID: 3914
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol NF-YA4 NF-YA7 LOC100499754 NF-YA16 LOC101260988 LOC4352778 LOC4344874 LOC100383246 LOC100194365 LOC103867423 LOC103840389 LOC100249692 LOC7487567 LOC18103293 LOC11413865 LOC123119379 LOC100037532 LOC123449586 LOC123396343 LOC107906314 LOC107924915 LOC106367269 LOC125600621 LOC8070158 LOC8059799 LOC102600275 LOC102579930 LOC102608084 LOC100842793 LOC100844028 LOC107787566 LOC107807858
Function* nuclear factor Y, subunit A4 nuclear factor Y, subunit A7 putative CCAAT-binding transcription factor nuclear transcription factor Y subunit A-16 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 uncharacterized LOC100383246 uncharacterized LOC100194365 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 3
ath00566 Sulfoquinovose metabolism 3
ath00740 Riboflavin metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 9
ppo04626 Plant-pathogen interaction 4
ppo03040 Spliceosome 3
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 3
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818037 839929 100499754 100809036 101260988 4352778 4344874 100383246 100194365 103867423 103840389 100249692 7487567 18103293 11413865 123119379 100037532 123449586 123396343 107906314 107924915 106367269 125600621 8070158 8059799 102600275 102579930 102608084 100842793 100844028 107787566 107807858
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