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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125604576   TPR repeat-containing thioredoxin TTL1-like 
 bna-r.1   106377291   TPR repeat-containing thioredoxin TTL1-like 
 bna-r.1   106368282   TPR repeat-containing thioredoxin TTL4-like 
 bna-r.1   106347260   TPR repeat-containing thioredoxin TTL1 
 bra-r.6   103832678   TPR repeat-containing thioredoxin TTL1 
 bra-r.6   103841735   TPR repeat-containing thioredoxin TTL4 
 bra-r.6   103866649   inactive TPR repeat-containing thioredoxin TTL3 
 ath-u.5   TTL3   tetratricopetide-repeat thioredoxin-like 3 
 ath-u.5   TTL4   tetratricopetide-repeat thioredoxin-like 4 
 ath-u.5   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ghi-r.1   107917788   TPR repeat-containing thioredoxin TTL1 
 ghi-r.1   107909180   TPR repeat-containing thioredoxin TTL1 
 ghi-r.1   107888526   inactive TPR repeat-containing thioredoxin TTL3 
 cit-r.1   102610443   inactive TPR repeat-containing thioredoxin TTL3 
 cit-r.1   102625520   TPR repeat-containing thioredoxin TTL1 
 gma-u.5   100805790   TPR repeat-containing thioredoxin TTL1 
 gma-u.5   100804531   TPR repeat-containing thioredoxin TTL1 
 gma-u.5   100799577   TPR repeat-containing thioredoxin TTL1 
 vvi-u.5   100255533   TPR repeat-containing thioredoxin TTL1 
 vvi-u.5   100247135   inactive TPR repeat-containing thioredoxin TTL3 
 ppo-u.5   18095504   inactive TPR repeat-containing thioredoxin TTL3 
 ppo-u.5   7455956   TPR repeat-containing thioredoxin TTL1 
 mtr-u.5   25487248   TPR repeat-containing thioredoxin TTL1 
 sly-u.5   101266241   TPR repeat-containing thioredoxin TTL1 
 sot-r.1   102604617   TPR repeat-containing thioredoxin TTL1 
 nta-r.1   107762240   TPR repeat-containing thioredoxin TTL1 
 nta-r.1   107817678   TPR repeat-containing thioredoxin TTL1-like 
 nta-r.1   107817124   TPR repeat-containing thioredoxin TTL1 
 osa-u.5   4324584   inactive TPR repeat-containing thioredoxin TTL3 
 osa-u.5   4338096   TPR repeat-containing thioredoxin TTL1 
 zma-u.5   103653343   TPR repeat-containing thioredoxin TTL1 
 zma-u.5   100191407   TPR repeat-containing thioredoxin TTL1 
 tae-r.2   123077725   inactive TPR repeat-containing thioredoxin TTL3 
 tae-r.2   123060687   inactive TPR repeat-containing thioredoxin TTL3 
 tae-r.2   123069203   inactive TPR repeat-containing thioredoxin TTL3 
 hvu-r.1   123443130   inactive TPR repeat-containing thioredoxin TTL3-like 
 sbi-r.1   8079505   inactive TPR repeat-containing thioredoxin TTL3 

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Top 50 coexpressed genes to 125604576 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125604576 (bna-r.1 coexpression data)

CoexMap"125604576"


bnaLOC125604576 | Entrez gene ID : 125604576    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi cre bdi
Paralog 4 3 3 3 2 3 2 2 1 1 1 3 2 2 3 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048630839.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  mito 1,  vacu 1,  cysk 1  (predict for XP_048630839.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_048630839.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125604576
bna-r.1
for
106377291
bna-r.1
for
106368282
bna-r.1
for
106347260
bra-r.6
for
103832678
bra-r.6
for
103841735
bra-r.6
for
103866649
ath-u.5
for
TTL3
ath-u.5
for
TTL4
ath-u.5
for
TTL1
ghi-r.1
for
107917788
ghi-r.1
for
107909180
ghi-r.1
for
107888526
cit-r.1
for
102610443
cit-r.1
for
102625520
gma-u.5
for
100805790
gma-u.5
for
100804531
gma-u.5
for
100799577
vvi-u.5
for
100255533
vvi-u.5
for
100247135
ppo-u.5
for
18095504
ppo-u.5
for
7455956
mtr-u.5
for
25487248
sly-u.5
for
101266241
sot-r.1
for
102604617
nta-r.1
for
107762240
nta-r.1
for
107817678
nta-r.1
for
107817124
osa-u.5
for
4324584
osa-u.5
for
4338096
zma-u.5
for
103653343
zma-u.5
for
100191407
tae-r.2
for
123077725
tae-r.2
for
123060687
tae-r.2
for
123069203
hvu-r.1
for
123443130
sbi-r.1
for
8079505


Ortholog ID: 3000
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu sbi
Symbol LOC106377291 LOC106368282 LOC106388282 LOC103832678 LOC103866649 LOC103868440 TTL3 TTL4 TTL1 LOC107909180 LOC107928386 LOC107915830 LOC102610443 LOC102625520 LOC100805790 LOC100799577 LOC100792373 LOC100255533 LOC100247135 LOC18095504 LOC7455956 LOC25487248 LOC101266241 LOC102604617 LOC107762240 LOC107817124 LOC107769108 LOC4324584 LOC4338096 LOC103653343 LOC100191407 LOC123077725 LOC123060687 LOC123069203 LOC123443130 LOC8079505
Function* TPR repeat-containing thioredoxin TTL1-like TPR repeat-containing thioredoxin TTL4-like inactive TPR repeat-containing thioredoxin TTL3-like TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 tetratricopetide-repeat thioredoxin-like 3 tetratricopetide-repeat thioredoxin-like 4 tetratricopetide-repeat thioredoxin-like 1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3-like inactive TPR repeat-containing thioredoxin TTL3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 4
bra00541 Biosynthesis of various nucleotide sugars 3
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 4
osa01232 Nucleotide metabolism 4
osa00230 Purine metabolism 3
osa00480 Glutathione metabolism 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106377291 106368282 106388282 103832678 103866649 103868440 818858 825031 841764 107909180 107928386 107915830 102610443 102625520 100805790 100799577 100792373 100255533 100247135 18095504 7455956 25487248 101266241 102604617 107762240 107817124 107769108 4324584 4338096 103653343 100191407 123077725 123060687 123069203 123443130 8079505
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