ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	125606980	T-complex protein 1 subunit gamma
bna-r.1	106352790	T-complex protein 1 subunit gamma
bna-r.1	106388853	T-complex protein 1 subunit gamma
bra-r.6	103850000	T-complex protein 1 subunit gamma
bra-r.6	103859128	T-complex protein 1 subunit gamma
ath-u.5	AT5G26360	TCP-1/cpn60 chaperonin family protein
ghi-r.1	107914458	T-complex protein 1 subunit gamma
ghi-r.1	107897176	T-complex protein 1 subunit gamma
cit-r.1	102616859	T-complex protein 1 subunit gamma-like
cit-r.1	102606669	T-complex protein 1 subunit gamma
gma-u.5	100813370	T-complex protein 1 subunit gamma
gma-u.5	100802143	T-complex protein 1 subunit gamma
gma-u.5	100778141	T-complex protein 1 subunit gamma
vvi-u.5	100255417	T-complex protein 1 subunit gamma
vvi-u.5	100264926	T-complex protein 1 subunit gamma
ppo-u.5	7472582	T-complex protein 1 subunit gamma
ppo-u.5	18109955	T-complex protein 1 subunit gamma
ppo-u.5	7458880	T-complex protein 1 subunit gamma
mtr-u.5	11446804	T-complex protein 1 subunit gamma
sly-u.5	101246428	T-complex protein 1 subunit gamma
sot-r.1	102578754	T-complex protein 1 subunit gamma
nta-r.1	107821431	T-complex protein 1 subunit gamma
nta-r.1	107774646	T-complex protein 1 subunit gamma
nta-r.1	107770838	T-complex protein 1 subunit gamma-like
osa-u.5	4328872	T-complex protein 1 subunit gamma
osa-u.5	4341219	T-complex protein 1 subunit gamma
zma-u.5	100285961	uncharacterized LOC100285961
zma-u.5	103654781	T-complex protein 1 subunit gamma
tae-r.2	123156094	T-complex protein 1 subunit gamma
tae-r.2	123147902	T-complex protein 1 subunit gamma
tae-r.2	123164375	T-complex protein 1 subunit gamma
hvu-r.1	123413238	T-complex protein 1 subunit gamma
sbi-r.1	8054213	T-complex protein 1 subunit gamma
bdi-r.1	100835308	T-complex protein 1 subunit gamma
cre-r.1	CHLRE_10g443250v5	uncharacterized protein

Top 50 coexpressed genes to 125606980 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 125606980 (bna-r.1 coexpression data)

CoexMap"125606980"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006457 [list] [network] protein folding

(545 genes)

IEA

GO CC

GO:0005832 [list] [network] chaperonin-containing T-complex

(52 genes)

IEA

GO MF

GO:0140662 [list] [network] ATP-dependent protein folding chaperone	(188 genes)	IEA
GO:0051082 [list] [network] unfolded protein binding	(376 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(1360 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5995 genes)	IEA

Protein

XP_048632243.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, pero 2, cyto_E.R. 2, cyto_plas 2

(predict for XP_048632243.1)

Subcellular
localization
TargetP

other 7

(predict for XP_048632243.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125606980	bna-r.1 for 106352790	bna-r.1 for 106388853	bra-r.6 for 103850000	bra-r.6 for 103859128	ath-u.5 for AT5G26360	ghi-r.1 for 107914458	ghi-r.1 for 107897176	cit-r.1 for 102616859	cit-r.1 for 102606669	gma-u.5 for 100813370	gma-u.5 for 100802143	gma-u.5 for 100778141	vvi-u.5 for 100255417	vvi-u.5 for 100264926	ppo-u.5 for 7472582	ppo-u.5 for 18109955	ppo-u.5 for 7458880	mtr-u.5 for 11446804	sly-u.5 for 101246428	sot-r.1 for 102578754	nta-r.1 for 107821431	nta-r.1 for 107774646	nta-r.1 for 107770838	osa-u.5 for 4328872	osa-u.5 for 4341219	zma-u.5 for 100285961	zma-u.5 for 103654781	tae-r.2 for 123156094	tae-r.2 for 123147902	tae-r.2 for 123164375	hvu-r.1 for 123413238	sbi-r.1 for 8054213	bdi-r.1 for 100835308	cre-r.1 for CHLRE_10g443250v5

Ortholog

Ortholog ID: 5846

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

T-complex protein 1 subunit gamma

TCP-1/cpn60 chaperonin family protein

T-complex protein 1 subunit gamma

T-complex protein 1 subunit gamma-like

T-complex protein 1 subunit gamma

uncharacterized LOC100285961

T-complex protein 1 subunit gamma

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5
bna04120	Ubiquitin mediated proteolysis	3
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5
bna04120	Ubiquitin mediated proteolysis	3
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi01232	Nucleotide metabolism	4
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi01232	Nucleotide metabolism	4
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	8
gma03013	Nucleocytoplasmic transport	2
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	5
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	7
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo00020	Citrate cycle (TCA cycle)	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03015	mRNA surveillance pathway	2
mtr00970	Aminoacyl-tRNA biosynthesis	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	4
sly03008	Ribosome biogenesis in eukaryotes	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot04626	Plant-pathogen interaction	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	3
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00280	Valine, leucine and isoleucine degradation	2
nta00410	beta-Alanine metabolism	2
nta00640	Propanoate metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	4
osa00340	Histidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae03040	Spliceosome	2
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03018	RNA degradation	3
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	3
cre03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

125606980

106352790

106388853

103850000

103859128

832705

107914458

107897176

102616859

102606669

100813370

100802143

100778141

100255417

100264926

7472582

18109955

7458880

11446804

101246428

102578754

107821431

107774646

107804248

4328872

4341219

100285961

103654781

123156094

123147902

123164375

123413238

8054213

100835308

5716089

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	2	2	3	2	3	1	1	1	3	2	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125606980 (bna-r.1 coexpression data)

Top 50 enrichment test to 125606980 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**