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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125608914   transcription factor bHLH115-like 
 bna-r.1   111206483   transcription factor bHLH115 
 bna-r.1   125583924   transcription factor ILR3-like 
 bna-r.1   106366416   transcription factor ILR3 
 bra-r.6   103868591   transcription factor bHLH115 
 bra-r.6   103857030   transcription factor ILR3 
 bra-r.6   103851945   transcription factor ILR3 
 ath-u.5   bHLH34   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   bHLH104   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   ILR3   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ghi-r.1   107917918   transcription factor ILR3 
 ghi-r.1   107920326   transcription factor ILR3 
 ghi-r.1   107928789   transcription factor ILR3 
 cit-r.1   127899974   transcription factor ILR3-like 
 cit-r.1   102611674   transcription factor ILR3 
 cit-r.1   102613226   transcription factor bHLH104 
 gma-u.5   100813088   transcription factor ILR3-like 
 gma-u.5   100808803   transcription factor ILR3 
 gma-u.5   100806838   transcription factor bHLH115-like 
 vvi-u.5   100245935   transcription factor ILR3 
 vvi-u.5   100264856   transcription factor bHLH104 
 vvi-u.5   100258884   transcription factor ILR3 
 ppo-u.5   18095890   transcription factor ILR3 
 ppo-u.5   18101598   transcription factor bHLH104 
 ppo-u.5   7497040   transcription factor ILR3 
 mtr-u.5   11419849   transcription factor bHLH104 
 mtr-u.5   11409489   transcription factor ILR3 
 mtr-u.5   11445675   transcription factor ILR3 
 sly-u.5   101264073   transcription factor ILR3-like 
 sly-u.5   101247632   transcription factor ILR3 
 sly-u.5   101248331   transcription factor bHLH104 
 sot-r.1   102603905   transcription factor ILR3 
 sot-r.1   102584888   transcription factor ILR3-like 
 sot-r.1   102584960   transcription factor ILR3-like 
 nta-r.1   107810790   transcription factor ILR3-like 
 nta-r.1   107780376   transcription factor ILR3 
 nta-r.1   107762037   transcription factor ILR3 
 osa-u.5   4328080   transcription factor ILR3 
 osa-u.5   4344627   transcription factor ILR3 
 osa-u.5   4343509   transcription factor ILR3 
 zma-u.5   100282509   uncharacterized LOC100282509 
 zma-u.5   100193990   uncharacterized LOC100193990 
 zma-u.5   103639990   transcription factor ILR3 
 tae-r.2   123058649   transcription factor ILR3 
 tae-r.2   123044620   transcription factor ILR3 
 tae-r.2   123052493   transcription factor ILR3 
 hvu-r.1   123425811   transcription factor ILR3-like 
 hvu-r.1   123415167   transcription factor ILR3-like 
 hvu-r.1   123407909   transcription factor ILR3-like 
 sbi-r.1   110437025   transcription factor ILR3-like 
 sbi-r.1   8072534   transcription factor ILR3 
 sbi-r.1   8081711   transcription factor ILR3 
 bdi-r.1   100822537   transcription factor ILR3 
 bdi-r.1   100829413   transcription factor ILR3 
 bdi-r.1   100832841   transcription factor ILR3 
 cre-r.1   CHLRE_05g241636v5   uncharacterized protein 

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Top 50 coexpressed genes to 125608914 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125608914 (bna-r.1 coexpression data)

CoexMap"125608914"


bnaLOC125608914 | Entrez gene ID : 125608914    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006879 [list] [network] intracellular iron ion homeostasis  (51 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1531 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
Protein XP_048635516.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cysk 1  (predict for XP_048635516.1)
Subcellular
localization
TargetP
other 7  (predict for XP_048635516.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125608914
bna-r.1
for
111206483
bna-r.1
for
125583924
bna-r.1
for
106366416
bra-r.6
for
103868591
bra-r.6
for
103857030
bra-r.6
for
103851945
ath-u.5
for
bHLH34
ath-u.5
for
bHLH104
ath-u.5
for
ILR3
ghi-r.1
for
107917918
ghi-r.1
for
107920326
ghi-r.1
for
107928789
cit-r.1
for
127899974
cit-r.1
for
102611674
cit-r.1
for
102613226
gma-u.5
for
100813088
gma-u.5
for
100808803
gma-u.5
for
100806838
vvi-u.5
for
100245935
vvi-u.5
for
100264856
vvi-u.5
for
100258884
ppo-u.5
for
18095890
ppo-u.5
for
18101598
ppo-u.5
for
7497040
mtr-u.5
for
11419849
mtr-u.5
for
11409489
mtr-u.5
for
11445675
sly-u.5
for
101264073
sly-u.5
for
101247632
sly-u.5
for
101248331
sot-r.1
for
102603905
sot-r.1
for
102584888
sot-r.1
for
102584960
nta-r.1
for
107810790
nta-r.1
for
107780376
nta-r.1
for
107762037
osa-u.5
for
4328080
osa-u.5
for
4344627
osa-u.5
for
4343509
zma-u.5
for
100282509
zma-u.5
for
100193990
zma-u.5
for
103639990
tae-r.2
for
123058649
tae-r.2
for
123044620
tae-r.2
for
123052493
hvu-r.1
for
123425811
hvu-r.1
for
123415167
hvu-r.1
for
123407909
sbi-r.1
for
110437025
sbi-r.1
for
8072534
sbi-r.1
for
8081711
bdi-r.1
for
100822537
bdi-r.1
for
100829413
bdi-r.1
for
100832841
cre-r.1
for
CHLRE_05g241636v5


Ortholog ID: 595
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC106449668 LOC106390538 LOC106346014 LOC103849035 LOC103844925 LOC103828768 bHLH34 bHLH104 bHLH115 LOC107917918 LOC107939864 LOC107942996 LOC127899974 LOC102611674 LOC102623026 LOC100813088 LOC100803143 LOC100783689 LOC100245935 LOC100264856 LOC100258884 LOC18095890 LOC7492418 LOC7470923 LOC11419849 LOC11409489 LOC11445675 LOC101247632 LOC101248331 LOC101259956 LOC102603905 LOC102584888 LOC102584960 LOC107780376 LOC107762037 LOC107816467 LOC4328080 LOC4344627 LOC4338978 LOC100282509 LOC118476893 LOC100280093 LOC123044620 LOC123143210 LOC123158275 LOC123425811 LOC123407909 LOC123406123 LOC8072534 LOC8081711 LOC110434655 LOC100822537 LOC100832841 LOC100840541 CHLRE_05g241636v5
Function* transcription factor bHLH34 transcription factor ILR3 transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 transcription factor bHLH34 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3-like transcription factor bHLH115 bHLH transcription factor transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3-like transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 uncharacterized LOC100282509 transcription factor ILR3 uncharacterized LOC100280093 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3-like transcription factor ILR3-like transcription factor ILR3 transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 2
bra00750 Vitamin B6 metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath00760 Nicotinate and nicotinamide metabolism 2
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00640 Propanoate metabolism 4
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 4
gma00071 Fatty acid degradation 3
gma00620 Pyruvate metabolism 3
gma00053 Ascorbate and aldarate metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr00020 Citrate cycle (TCA cycle) 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 7
mtr00020 Citrate cycle (TCA cycle) 4
mtr01200 Carbon metabolism 4
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 2
sot00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 7
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00260 Glycine, serine and threonine metabolism 4
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 5
osa01310 Nitrogen cycle 5
osa00195 Photosynthesis 3
osa00480 Glutathione metabolism 3
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 4
tae01200 Carbon metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04081 Hormone signaling 2
cre00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106449668 106390538 106346014 103849035 103844925 103828768 821899 827086 841529 107917918 107939864 107942996 127899974 102611674 102623026 100813088 100803143 100783689 100245935 100264856 100258884 18095890 7492418 7470923 11419849 11409489 11445675 101247632 101248331 101259956 102603905 102584888 102584960 107780376 107762037 107816467 4328080 4344627 4338978 100282509 118476893 100280093 123044620 123143210 123158275 123425811 123407909 123406123 8072534 8081711 110434655 100822537 100832841 100840541 66053434
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