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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125609206   protein LHCP TRANSLOCATION DEFECT-like 
 bna-r.1   125588709   protein LHCP TRANSLOCATION DEFECT-like 
 bna-r.1   106451656   protein LHCP TRANSLOCATION DEFECT 
 bna-r.1   125601450   protein LHCP TRANSLOCATION DEFECT-like 
 bra-r.6   103871313   protein LHCP TRANSLOCATION DEFECT-like 
 bra-r.6   103869310   protein LHCP TRANSLOCATION DEFECT 
 bra-r.6   103868603   protein LHCP TRANSLOCATION DEFECT 
 ath-u.5   GDC1   Ankyrin repeat family protein 
 ghi-r.1   107938646   protein LHCP TRANSLOCATION DEFECT 
 ghi-r.1   107930297   protein LHCP TRANSLOCATION DEFECT 
 ghi-r.1   107918074   protein LHCP TRANSLOCATION DEFECT 
 cit-r.1   102616185   protein LHCP TRANSLOCATION DEFECT 
 gma-u.5   100500557   ankyrin repeats-containing protein 
 gma-u.5   100499940   uncharacterized LOC100499940 
 vvi-u.5   100260680   protein LHCP TRANSLOCATION DEFECT 
 ppo-u.5   18095939   protein LHCP TRANSLOCATION DEFECT 
 mtr-u.5   11417698   protein LHCP TRANSLOCATION DEFECT 
 sly-u.5   104649487   ankyrin repeat family protein 
 sot-r.1   102589462   protein LHCP TRANSLOCATION DEFECT 
 nta-r.1   107781119   protein LHCP TRANSLOCATION DEFECT-like 
 nta-r.1   107760099   protein LHCP TRANSLOCATION DEFECT 
 osa-u.5   4343402   protein LHCP TRANSLOCATION DEFECT 
 zma-u.5   100277526   Protein LHCP TRANSLOCATION DEFECT 
 tae-r.2   123044664   protein LHCP TRANSLOCATION DEFECT 
 tae-r.2   123052538   protein LHCP TRANSLOCATION DEFECT 
 tae-r.2   123188417   protein LHCP TRANSLOCATION DEFECT 
 hvu-r.1   123425864   protein LHCP TRANSLOCATION DEFECT 
 sbi-r.1   8080135   protein LHCP TRANSLOCATION DEFECT 
 bdi-r.1   100831388   protein LHCP TRANSLOCATION DEFECT 
 cre-r.1   CHLRE_12g551950v5   uncharacterized protein 

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Top 50 coexpressed genes to 125609206 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125609206 (bna-r.1 coexpression data)

CoexMap"125609206"


bnaLOC125609206 | Entrez gene ID : 125609206    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090391 [list] [network] granum assembly  (7 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (894 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (300 genes)  IEA  
GO:0009570 [list] [network] chloroplast stroma  (365 genes)  IEA  
GO MF
Protein XP_048636282.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_048636282.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048636282.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125609206
bna-r.1
for
125588709
bna-r.1
for
106451656
bna-r.1
for
125601450
bra-r.6
for
103871313
bra-r.6
for
103869310
bra-r.6
for
103868603
ath-u.5
for
GDC1
ghi-r.1
for
107938646
ghi-r.1
for
107930297
ghi-r.1
for
107918074
cit-r.1
for
102616185
gma-u.5
for
100500557
gma-u.5
for
100499940
vvi-u.5
for
100260680
ppo-u.5
for
18095939
mtr-u.5
for
11417698
sly-u.5
for
104649487
sot-r.1
for
102589462
nta-r.1
for
107781119
nta-r.1
for
107760099
osa-u.5
for
4343402
zma-u.5
for
100277526
tae-r.2
for
123044664
tae-r.2
for
123052538
tae-r.2
for
123188417
hvu-r.1
for
123425864
sbi-r.1
for
8080135
bdi-r.1
for
100831388
cre-r.1
for
CHLRE_12g551950v5


Ortholog ID: 6727
Species bna bna bna bra bra bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC125601450 LOC106406287 LOC106377589 LOC103871313 LOC103869310 LOC103868603 GDC1 LOC107938646 LOC107930297 LOC107918074 LOC102616185 LOC100500557 LOC100499940 LOC100260680 LOC18095939 LOC11417698 LOC104649487 LOC102589462 LOC107781119 LOC107760099 LOC4343402 LOC100277526 LOC123044664 LOC123052538 LOC123188417 LOC123425864 LOC8080135 LOC100831388 CHLRE_12g551950v5
Function* protein LHCP TRANSLOCATION DEFECT-like protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT-like protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT Ankyrin repeat family protein protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT ankyrin repeats-containing protein uncharacterized LOC100499940 protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT ankyrin repeat family protein protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT-like protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT Protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT protein LHCP TRANSLOCATION DEFECT uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00270 Cysteine and methionine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00860 Porphyrin metabolism 6
sbi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 8
cre01240 Biosynthesis of cofactors 4
cre00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125601450 106406287 106377589 103871313 103869310 103868603 841512 107938646 107930297 107918074 102616185 100500557 100499940 100260680 18095939 11417698 104649487 102589462 107781119 107760099 4343402 100277526 123044664 123052538 123188417 123425864 8080135 100831388 5719676
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