Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782325   pentatricopeptide repeat-containing protein At4g21065 
 vvi-u.5   100241349   putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 
 vvi-u.5   100241261   pentatricopeptide repeat-containing protein At2g01510, mitochondrial 
 mtr-u.5   25483803   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 mtr-u.5   11423288   putative pentatricopeptide repeat-containing protein At3g23330 
 sly-u.5   101268748   pentatricopeptide repeat-containing protein CRR2, chloroplastic-like 
 sly-u.5   101258097   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   103633575   pentatricopeptide repeat-containing protein At4g21065 

close


Top 50 coexpressed genes to 100782325 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100782325 (gma-u.5 coexpression data)

CoexMap"127903009"


citLOC127903009 | Entrez gene ID : 127903009    
Species gma vvi mtr sly zma bdi hvu bra cit bna ath ppo sbi ghi osa sot nta cre tae
Paralog 1 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052299501.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  nucl 1,  cyto 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_052299501.1)
Subcellular
localization
TargetP
mito 1  (predict for XP_052299501.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100782325
vvi-u.5
for
100241349
vvi-u.5
for
100241261
mtr-u.5
for
25483803
mtr-u.5
for
11423288
sly-u.5
for
101268748
sly-u.5
for
101258097
zma-u.5
for
103633575


Ortholog ID: 7887
Species cit bra ghi bna bna gma vvi mtr mtr sly sly sot sot nta nta zma hvu bdi
Symbol LOC102617710 LOC103868369 LOC107925550 LOC106412071 LOC125608542 LOC100782325 LOC104880153 LOC25483803 LOC11423288 LOC101268748 LOC101258097 LOC107059474 LOC102603237 LOC107795475 LOC107774015 LOC103633575 LOC123408875 LOC112269268
Function* pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At2g33760-like pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760-like pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein CRR2, chloroplastic-like pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like pentatricopeptide repeat-containing protein CRR2, chloroplastic-like putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At4g21065-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617710 103868369 107925550 106412071 125608542 100782325 104880153 25483803 11423288 101268748 101258097 107059474 102603237 107795475 107774015 103633575 123408875 112269268
The preparation time of this page was 0.1 [sec].