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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102608780   60S acidic ribosomal protein P2A-like 
 cit-r.1   102611784   60S acidic ribosomal protein P2-4 
 ath-u.5   AT2G27720   60S acidic ribosomal protein family 
 ath-u.5   AT5G40040   60S acidic ribosomal protein family 
 ath-u.5   AT3G44590   60S acidic ribosomal protein family 
 bra-r.6   103864796   60S acidic ribosomal protein P2-2 
 bra-r.6   103854194   60S acidic ribosomal protein P2-3-like 
 ghi-r.1   107928203   60S acidic ribosomal protein P2A 
 ghi-r.1   107925548   60S acidic ribosomal protein P2A 
 ghi-r.1   107908706   60S acidic ribosomal protein P2A 
 bna-r.1   106446743   60S acidic ribosomal protein P2-2 
 bna-r.1   106443722   60S acidic ribosomal protein P2-1 
 bna-r.1   106424550   60S acidic ribosomal protein P2-3 
 gma-u.5   100791682   60S acidic ribosomal protein P2B 
 gma-u.5   100306264   uncharacterized LOC100306264 
 gma-u.5   100500331   uncharacterized LOC100500331 
 vvi-u.5   100257998   large ribosomal subunit protein P2B 
 vvi-u.5   100254522   large ribosomal subunit protein P2 
 ppo-u.5   18097960   60S acidic ribosomal protein P2B 
 ppo-u.5   7474943   60S acidic ribosomal protein P2B 
 mtr-u.5   25483860   60S acidic ribosomal protein P2-4 
 mtr-u.5   25480680   60S acidic ribosomal protein P2-2 
 mtr-u.5   25487532   60S acidic ribosomal protein P2-1 
 sly-u.5   101253452   large ribosomal subunit protein P2y 
 sly-u.5   101249089   large ribosomal subunit protein P2 
 sot-r.1   102588127   60S acidic ribosomal protein P2-like 
 nta-r.1   107766732   large ribosomal subunit protein P2-like 
 nta-r.1   107770879   large ribosomal subunit protein P2B 
 osa-u.5   4329540   60S acidic ribosomal protein P2A 
 osa-u.5   4326782   large ribosomal subunit protein P2A 
 zma-u.5   542551   60S acidic ribosomal protein P2A-like 
 zma-u.5   542340   acidic ribosomal protein P2b (rpp2b) 
 zma-u.5   542338   acidic ribosomal protein P2a-3 
 tae-r.2   123189145   60S acidic ribosomal protein P2A 
 tae-r.2   542908   60S acidic ribosomal protein P2B 
 hvu-r.1   123411699   60S acidic ribosomal protein P2-C-like 
 hvu-r.1   123446135   60S acidic ribosomal protein P2B-like 
 hvu-r.1   123426652   60S acidic ribosomal protein P2A 
 sbi-r.1   8064717   60S acidic ribosomal protein P2A 
 sbi-r.1   8072508   60S acidic ribosomal protein P2B 
 sbi-r.1   8075266   60S acidic ribosomal protein P2A 
 bdi-r.1   100838935   60S acidic ribosomal protein P2A 
 bdi-r.1   104581254   60S acidic ribosomal protein P2A 
 cre-r.1   CHLRE_02g143050v5   uncharacterized protein 

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Top 50 coexpressed genes to 102608780 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102608780 (cit-r.1 coexpression data)

CoexMap"127903043"


citLOC127903043 | Entrez gene ID : 127903043    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 2 3 3 3 2 2 3 2 1 2 2 3 2 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002182 [list] [network] cytoplasmic translational elongation  (3 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (98 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (284 genes)  IEA  
Protein XP_052299579.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 1,  mito 1,  cysk_nucl 1,  chlo 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_052299579.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_052299579.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102608780
cit-r.1
for
102611784
ath-u.5
for
AT2G27720
ath-u.5
for
AT5G40040
ath-u.5
for
AT3G44590
bra-r.6
for
103864796
bra-r.6
for
103854194
ghi-r.1
for
107928203
ghi-r.1
for
107925548
ghi-r.1
for
107908706
bna-r.1
for
106446743
bna-r.1
for
106443722
bna-r.1
for
106424550
gma-u.5
for
100791682
gma-u.5
for
100306264
gma-u.5
for
100500331
vvi-u.5
for
100257998
vvi-u.5
for
100254522
ppo-u.5
for
18097960
ppo-u.5
for
7474943
mtr-u.5
for
25483860
mtr-u.5
for
25480680
mtr-u.5
for
25487532
sly-u.5
for
101253452
sly-u.5
for
101249089
sot-r.1
for
102588127
nta-r.1
for
107766732
nta-r.1
for
107770879
osa-u.5
for
4329540
osa-u.5
for
4326782
zma-u.5
for
542551
zma-u.5
for
542340
zma-u.5
for
542338
tae-r.2
for
123189145
tae-r.2
for
542908
hvu-r.1
for
123411699
hvu-r.1
for
123446135
hvu-r.1
for
123426652
sbi-r.1
for
8064717
sbi-r.1
for
8072508
sbi-r.1
for
8075266
bdi-r.1
for
100838935
bdi-r.1
for
104581254
cre-r.1
for
CHLRE_02g143050v5


Ortholog ID: 791
Species cit cit ath ath ath bra ghi ghi ghi bna bna bna gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot nta nta nta osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC102608780 LOC102611784 AT2G27720 AT3G44590 AT2G27710 LOC103854194 LOC107925548 LOC107931932 LOC107931933 LOC106424327 LOC125606442 LOC106395681 LOC100499761 LOC100787024 LOC100817491 LOC100254522 LOC100241998 LOC100241445 LOC18097960 LOC7474943 LOC25483860 LOC25480680 LOC25487532 LOC101253452 LOC101249089 LOC101246850 LOC102577788 LOC107815227 LOC107808872 LOC107780915 LOC4329540 LOC4326782 LOC542551 LOC542323 LOC100194313 LOC123156814 LOC123045396 LOC123411699 LOC123446135 LOC123426652 LOC8072508 LOC8075266 LOC8082583 LOC100838935 LOC100841041 CHLRE_02g143050v5
Function* 60S acidic ribosomal protein P2A-like 60S acidic ribosomal protein P2-4 60S acidic ribosomal protein family 60S acidic ribosomal protein family 60S acidic ribosomal protein family 60S acidic ribosomal protein P2-3-like 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2B 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2-2 60S acidic ribosomal protein P2-3-like 60S acidic ribosomal protein P2-3-like uncharacterized LOC100499761 60S acidic ribosomal protein P2-2 60S acidic ribosomal protein P2-4 large ribosomal subunit protein P2 large ribosomal subunit protein P2 60S acidic ribosomal protein P2B-like 60S acidic ribosomal protein P2B 60S acidic ribosomal protein P2B 60S acidic ribosomal protein P2-4 60S acidic ribosomal protein P2-2 60S acidic ribosomal protein P2-1 large ribosomal subunit protein P2y large ribosomal subunit protein P2 large ribosomal subunit protein P2 uncharacterized LOC102577788 large ribosomal subunit protein P2A large ribosomal subunit protein P2w-like large ribosomal subunit protein P2-like 60S acidic ribosomal protein P2A large ribosomal subunit protein P2A 60S acidic ribosomal protein P2A-like acidic ribosomal protein P2a acidic ribosomal protein P2a-4 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2-C-like 60S acidic ribosomal protein P2B-like 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2B 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2A 60S acidic ribosomal protein P2A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae04120 Ubiquitin mediated proteolysis 5
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102608780 102611784 817318 823584 817317 103854194 107925548 107931932 107931933 106424327 125606442 106395681 100499761 100787024 100817491 100254522 100241998 100241445 18097960 7474943 25483860 25480680 25487532 101253452 101249089 101246850 102577788 107815227 107808872 107780915 4329540 4326782 542551 542323 100194313 123156814 123045396 123411699 123446135 123426652 8072508 8075266 8082583 100838935 100841041 5720458
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