ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18109451	glutamate receptor 2.8
ppo-u.5	7494710	glutamate receptor 3.3
gma-u.5	100799912	glutamate receptor 3.4
gma-u.5	100799966	glutamate receptor 2.8
mtr-u.5	11446836	glutamate receptor 2.7
mtr-u.5	11440528	glutamate receptor 3.6
ath-u.5	GLR2	glutamate receptor 2
ath-u.5	GLR3.3	glutamate receptor 3.3
ath-u.5	GLR3.4	glutamate receptor 3.4
bra-r.6	103844161	glutamate receptor 3.4
bra-r.6	103841075	glutamate receptor 3.6
ghi-r.1	107894003	glutamate receptor 3.2
ghi-r.1	107925140	glutamate receptor 2.7
bna-r.1	106371079	glutamate receptor 3.4
cit-r.1	102628154	glutamate receptor 2.7-like
cit-r.1	102628751	glutamate receptor 2.7-like
cit-r.1	102625433	glutamate receptor 3.3
sly-u.5	GLR1.2	glutamate receptor 1.2
sly-u.5	101253685	glutamate receptor 3.3
sly-u.5	101261421	glutamate receptor 2.1
sot-r.1	102603910	glutamate receptor 3.3
sot-r.1	102600393	glutamate receptor 2.3-like
nta-r.1	107807482	glutamate receptor 3.2
nta-r.1	107807265	glutamate receptor 3.7
nta-r.1	107809765	glutamate receptor 2.7-like
osa-u.5	4347119	glutamate receptor 2.8
osa-u.5	4330959	glutamate receptor 2.9
zma-u.5	103647444	glutamate receptor 2.8
zma-u.5	103647716	glutamate receptor 3.4
zma-u.5	100383810	uncharacterized LOC100383810
tae-r.2	123067785	glutamate receptor 3.5
tae-r.2	123145393	glutamate receptor 3.5
hvu-r.1	123401363	glutamate receptor 3.1-like
hvu-r.1	123402393	glutamate receptor 2.8-like
sbi-r.1	110430731	glutamate receptor 2.9-like
sbi-r.1	8060289	glutamate receptor 2.8
bdi-r.1	100821941	glutamate receptor 2.7
bdi-r.1	100828306	glutamate receptor 3.1
cre-r.1	CHLRE_16g685650v5	uncharacterized protein
cre-r.1	CHLRE_13g585400v5	uncharacterized protein
cre-r.1	CHLRE_12g542569v5	uncharacterized protein

Top 50 coexpressed genes to 18109451 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18109451 (ppo-u.5 coexpression data)

CoexMap"127903951"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(1125 genes)

IEA

GO MF

GO:0004970 [list] [network] glutamate-gated receptor activity

(22 genes)

IEA

Protein

XP_052309459.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 10

(predict for XP_052309459.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_052309459.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18109451	ppo-u.5 for 7494710	gma-u.5 for 100799912	gma-u.5 for 100799966	mtr-u.5 for 11446836	mtr-u.5 for 11440528	ath-u.5 for GLR2	ath-u.5 for GLR3.3	ath-u.5 for GLR3.4	bra-r.6 for 103844161	bra-r.6 for 103841075	ghi-r.1 for 107894003	ghi-r.1 for 107925140	bna-r.1 for 106371079	cit-r.1 for 102628154	cit-r.1 for 102628751	cit-r.1 for 102625433	sly-u.5 for GLR1.2	sly-u.5 for 101253685	sly-u.5 for 101261421	sot-r.1 for 102603910	sot-r.1 for 102600393	nta-r.1 for 107807482	nta-r.1 for 107807265	nta-r.1 for 107809765	osa-u.5 for 4347119	osa-u.5 for 4330959	zma-u.5 for 103647444	zma-u.5 for 103647716	zma-u.5 for 100383810	tae-r.2 for 123067785	tae-r.2 for 123145393	hvu-r.1 for 123401363	hvu-r.1 for 123402393	sbi-r.1 for 110430731	sbi-r.1 for 8060289	bdi-r.1 for 100821941	bdi-r.1 for 100828306	cre-r.1 for CHLRE_16g685650v5	cre-r.1 for CHLRE_13g585400v5	cre-r.1 for CHLRE_12g542569v5

Ortholog

Ortholog ID: 33

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

zma

tae

hvu

sbi

bdi

cre

Symbol

GLR2.1

GLR2.5

Function^*

glutamate receptor 2.8

glutamate receptor 3.6

glutamate receptor 2.7

glutamate receptor 3.3

glutamate receptor 3.4

glutamate receptor 2.7

glutamate receptor 3.4

glutamate receptor 2.7

glutamate receptor 2.1

glutamate receptor 2.5

glutamate receptor 2.2-like

glutamate receptor 2.5

glutamate receptor 3.5

glutamate receptor 2.7-like

glutamate receptor 3.4

glutamate receptor 3.2

glutamate receptor 3.6

glutamate receptor 3.4

glutamate receptor 3.5

glutamate receptor 3.7-like

glutamate receptor 2.7-like

glutamate receptor 3.6-like

glutamate receptor 3.3

glutamate receptor 2.4

glutamate receptor 3.4

glutamate receptor 2.8-like

glutamate receptor 3.7

glutamate receptor 2.1-like

glutamate receptor 2.9

glutamate receptor 2.8

glutamate receptor 3.1

glutamate receptor 3.5

glutamate receptor 2.8-like

glutamate receptor 2.9-like

glutamate receptor 2.8

glutamate receptor 3.4

glutamate receptor 2.2

glutamate receptor 3.5

glutamate receptor 3.4

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2
gma00906	Carotenoid biosynthesis	2
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00030	Pentose phosphate pathway	4
gma00710	Carbon fixation by Calvin cycle	4
gma01200	Carbon metabolism	4
gma01230	Biosynthesis of amino acids	4
gma00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra02010	ABC transporters	4
bra04981	Folate transport and metabolism	3
bra00071	Fatty acid degradation	2
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	6
bra04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00053	Ascorbate and aldarate metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2
sly04145	Phagosome	2
sly04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	4
tae04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00240	Pyrimidine metabolism	2
sbi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	4
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

18109451

7492132

100780320

100777478

100783715

11446836

11412759

25493042

832768

830991

103864578

103850758

103857425

100252161

107920395

107929611

107939601

106371079

106387971

106387972

102620676

102612517

101253685

101262627

101246724

102605116

102606129

107807265

107830025

107790599

103627840

103626528

123045151

123405588

110430731

8082712

8080138

100826189

100842314

100836921

5717639

5719394

66055729

The preparation time of this page was 0.4 [sec].


Species	ppo	gma	mtr	ath	bra	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	vvi
Paralog	2	2	2	3	2	2	1	3	3	2	3	2	3	2	2	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18109451 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18109451 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**