ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7480392	patellin-4
ppo-u.5	18108470	patellin-1
ppo-u.5	7475783	patellin-3
gma-u.5	100806382	patellin-3
gma-u.5	100805585	patellin-3
gma-u.5	100809450	patellin-4
mtr-u.5	120580125	patellin-3
mtr-u.5	11441033	patellin-3
mtr-u.5	11411118	patellin-6
ath-u.5	AT3G51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
ath-u.5	AT4G09160	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
bra-r.6	103858514	patellin-5
bra-r.6	103840314	patellin-4
bra-r.6	103860722	patellin-6
vvi-u.5	100262778	patellin-4
ghi-r.1	107904905	patellin-3
ghi-r.1	107904903	patellin-3
ghi-r.1	107913583	patellin-3
bna-r.1	111199204	patellin-4-like
bna-r.1	106452052	patellin-2-like
bna-r.1	106440091	patellin-6
cit-r.1	102614527	patellin-3
cit-r.1	102614816	patellin-3
cit-r.1	102624830	patellin-4
sly-u.5	TBP	patellin family protein
sly-u.5	101254657	patellin-4
sly-u.5	101247883	patellin-3
sot-r.1	102597890	patellin-3-like
sot-r.1	102580328	patellin-3-like
sot-r.1	102606320	patellin-4-like
nta-r.1	107806665	patellin-3-like
nta-r.1	107777688	patellin-3
osa-u.5	4341809	patellin-4
osa-u.5	4324771	patellin-3
osa-u.5	4338479	patellin-6
zma-u.5	100284590	uncharacterized LOC100284590
zma-u.5	100282751	uncharacterized LOC100282751
zma-u.5	100281982	patellin-5
tae-r.2	123071590	patellin-3
tae-r.2	123051017	patellin-6
tae-r.2	123056975	patellin-3
hvu-r.1	123446698	patellin-3-like
hvu-r.1	123444762	patellin-3-like
hvu-r.1	123437246	patellin-6
sbi-r.1	8058498	patellin-3
sbi-r.1	8061600	patellin-4
sbi-r.1	8063113	patellin-3
bdi-r.1	100834473	patellin-4
bdi-r.1	100838457	patellin-3
bdi-r.1	100843560	patellin-3
cre-r.1	CHLRE_02g101200v5	uncharacterized protein

Top 50 coexpressed genes to 7480392 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7480392 (ppo-u.5 coexpression data)

CoexMap"127904827"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008289 [list] [network] lipid binding

(331 genes)

IEA

Protein

XP_052305749.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 3

(predict for XP_052305749.1)

Subcellular
localization
TargetP

other 4, chlo 3

(predict for XP_052305749.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7480392	ppo-u.5 for 18108470	ppo-u.5 for 7475783	gma-u.5 for 100806382	gma-u.5 for 100805585	gma-u.5 for 100809450	mtr-u.5 for 120580125	mtr-u.5 for 11441033	mtr-u.5 for 11411118	ath-u.5 for AT3G51670	ath-u.5 for AT4G09160	bra-r.6 for 103858514	bra-r.6 for 103840314	bra-r.6 for 103860722	vvi-u.5 for 100262778	ghi-r.1 for 107904905	ghi-r.1 for 107904903	ghi-r.1 for 107913583	bna-r.1 for 111199204	bna-r.1 for 106452052	bna-r.1 for 106440091	cit-r.1 for 102614527	cit-r.1 for 102614816	cit-r.1 for 102624830	sly-u.5 for TBP	sly-u.5 for 101254657	sly-u.5 for 101247883	sot-r.1 for 102597890	sot-r.1 for 102580328	sot-r.1 for 102606320	nta-r.1 for 107806665	nta-r.1 for 107777688	osa-u.5 for 4341809	osa-u.5 for 4324771	osa-u.5 for 4338479	zma-u.5 for 100284590	zma-u.5 for 100282751	zma-u.5 for 100281982	tae-r.2 for 123071590	tae-r.2 for 123051017	tae-r.2 for 123056975	hvu-r.1 for 123446698	hvu-r.1 for 123444762	hvu-r.1 for 123437246	sbi-r.1 for 8058498	sbi-r.1 for 8061600	sbi-r.1 for 8063113	bdi-r.1 for 100834473	bdi-r.1 for 100838457	bdi-r.1 for 100843560	cre-r.1 for CHLRE_02g101200v5

Ortholog

Ortholog ID: 403

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

patellin-1

patellin-3

patellin-4-like

patellin-3

SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Sec14p-like phosphatidylinositol transfer family protein

patellin-4

patellin-3

patellin-6

patellin-3

patellin-4

patellin-3-like

patellin-6-like

patellin-4-like

patellin-3

patellin-4

patellin-6

patellin-4

patellin-3-like

patellin-6-like

patellin-3-like

patellin-3

patellin-4

uncharacterized LOC107780867

patellin-3

patellin-4-like

patellin-4

patellin-3

patellin-6

uncharacterized LOC100282751

patellin-5

uncharacterized LOC100192106

patellin-6

patellin-3

patellin-4

patellin-3-like

patellin-4

patellin-3

patellin-4

patellin-3

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo04517	IgSF CAM signaling	3
ppo04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5
gma00010	Glycolysis / Gluconeogenesis	2
gma00620	Pyruvate metabolism	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	5
bra04517	IgSF CAM signaling	5
bra04814	Motor proteins	5
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	8
ghi00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2
ghi04518	Integrin signaling	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	3
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00260	Glycine, serine and threonine metabolism	4
nta00350	Tyrosine metabolism	4
nta00360	Phenylalanine metabolism	4
nta00410	beta-Alanine metabolism	4
nta00950	Isoquinoline alkaloid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	6
sbi04145	Phagosome	2
sbi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi00062	Fatty acid elongation	2
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2
bdi00360	Phenylalanine metabolism	2
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	5
bdi04626	Plant-pathogen interaction	4
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi00270	Cysteine and methionine metabolism	2
bdi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00510	N-Glycan biosynthesis	4
cre00513	Various types of N-glycan biosynthesis	4
cre04141	Protein processing in endoplasmic reticulum	4

Expression

Expression pattern

Entrez Gene ID^*

18108470

7475783

100779100

100786707

120580125

11441033

25491806

824330

839949

843547

103840314

103830806

103841094

100247827

100259349

107896868

107890710

107943697

106371088

106367752

106367248

102614816

102624830

102631478

101254657

101255264

101259282

102597890

102580007

102592590

107780867

107781650

107815177

4341809

4324771

4338479

100282751

100281982

100192106

123051017

123079937

123159568

123446698

123444762

123413645

8058498

8061600

8063113

100838457

100843560

100843870

5725565

The preparation time of this page was 0.3 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	3	2	3	1	3	3	3	3	3	2	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7480392 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7480392 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**