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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494304   uncharacterized LOC7494304 
 gma-u.5   100820164   uncharacterized LOC100820164 
 mtr-u.5   11436417   probable helicase MAGATAMA 3 
 mtr-u.5   11426559   helicase SEN1 
 bra-r.6   103831068   probable helicase DDB_G0274399 
 vvi-u.5   100257019   uncharacterized LOC100257019 
 vvi-u.5   100262126   uncharacterized LOC100262126 
 vvi-u.5   100267290   uncharacterized LOC100267290 
 cit-r.1   102613717   uncharacterized ATP-dependent helicase C29A10.10c-like 
 cit-r.1   102614795   uncharacterized LOC102614795 
 cit-r.1   102614511   uncharacterized LOC102614511 
 sly-u.5   101252144   uncharacterized LOC101252144 
 sly-u.5   101258828   uncharacterized LOC101258828 
 sot-r.1   102598729   probable helicase MAGATAMA 3 
 sot-r.1   102595832   uncharacterized LOC102595832 
 sot-r.1   102592571   uncharacterized LOC102592571 
 nta-r.1   142161713   putative helicase MAGATAMA 3 
 nta-r.1   107763176   uncharacterized LOC107763176 
 nta-r.1   107780443   uncharacterized LOC107780443 
 zma-u.5   103633164   P-loop containing nucleoside triphosphate hydrolase superfamily protein 
 zma-u.5   103641914   uncharacterized LOC103641914 
 zma-u.5   103641916   uncharacterized LOC103641916 
 sbi-r.1   8074437   uncharacterized LOC8074437 

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Top 50 coexpressed genes to 7494304 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494304 (ppo-u.5 coexpression data)

CoexMap"127905179"


ppoLOC127905179 | Entrez gene ID : 127905179    
Species ppo gma mtr bra vvi cit sly sot nta zma sbi bdi osa tae bna cre ath ghi hvu
Paralog 1 1 2 1 3 3 2 3 3 3 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004386 [list] [network] helicase activity  (134 genes)  IEA  
Protein XP_052307959.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for XP_052307959.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052307959.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494304
gma-u.5
for
100820164
mtr-u.5
for
11436417
mtr-u.5
for
11426559
bra-r.6
for
103831068
vvi-u.5
for
100257019
vvi-u.5
for
100262126
vvi-u.5
for
100267290
cit-r.1
for
102613717
cit-r.1
for
102614795
cit-r.1
for
102614511
sly-u.5
for
101252144
sly-u.5
for
101258828
sot-r.1
for
102598729
sot-r.1
for
102595832
sot-r.1
for
102592571
nta-r.1
for
142161713
nta-r.1
for
107763176
nta-r.1
for
107780443
zma-u.5
for
103633164
zma-u.5
for
103641914
zma-u.5
for
103641916
sbi-r.1
for
8074437


Ortholog ID: 868
Species gma mtr bra vvi vvi vvi bna cit cit cit sly sot sot sot nta nta nta osa zma zma zma sbi sbi
Symbol LOC100820164 LOC11436417 LOC103831068 LOC100262126 LOC100267290 LOC100244982 LOC106392392 LOC102613717 LOC102614795 LOC102614511 LOC101252144 LOC102598729 LOC102595832 LOC102592571 LOC142161713 LOC107780673 LOC107796774 LOC9270804 LOC103633164 LOC103641914 LOC103641916 LOC8057692 LOC8057691
Function* uncharacterized LOC100820164 probable helicase MAGATAMA 3 probable helicase DDB_G0274399 uncharacterized LOC100262126 uncharacterized LOC100267290 uncharacterized LOC100244982 helicase sen1 uncharacterized ATP-dependent helicase C29A10.10c-like uncharacterized LOC102614795 uncharacterized LOC102614511 uncharacterized LOC101252144 probable helicase MAGATAMA 3 uncharacterized LOC102595832 uncharacterized LOC102592571 putative helicase MAGATAMA 3 uncharacterized LOC107780673 uncharacterized LOC107796774 helicase SEN1 P-loop containing nucleoside triphosphate hydrolase superfamily protein uncharacterized LOC103641914 uncharacterized LOC103641916 uncharacterized ATP-dependent helicase C29A10.10c helicase sen1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 4
sly01200 Carbon metabolism 4
sly00010 Glycolysis / Gluconeogenesis 3
sly00640 Propanoate metabolism 3
sly00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00920 Sulfur metabolism 2
nta01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100820164 11436417 103831068 100262126 100267290 100244982 106392392 102613717 102614795 102614511 101252144 102598729 102595832 102592571 142161713 107780673 107796774 9270804 103633164 103641914 103641916 8057692 8057691
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