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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7483231   beta-amyrin 28-monooxygenase 
 gma-u.5   100815640   beta-amyrin 28-monooxygenase 
 gma-u.5   100813159   beta-amyrin 28-monooxygenase 
 gma-u.5   100808690   beta-amyrin 28-monooxygenase 
 mtr-u.5   25491080   taxadiene 5-alpha hydroxylase 
 mtr-u.5   25491079   taxadiene 5-alpha hydroxylase 
 ath-u.5   CYP718   cytochrome P450, family 718 
 vvi-u.5   CYP716A15   cytochrome P450 CYP716A15 
 vvi-u.5   100255495   taxadiene 5-alpha hydroxylase 
 ghi-r.1   107918223   cytochrome P450 716B1 
 cit-r.1   102624521   taxadiene 5-alpha hydroxylase 
 cit-r.1   102625960   beta-amyrin 28-monooxygenase-like 
 sly-u.5   101251676   beta-amyrin 28-monooxygenase 
 sly-u.5   101252702   beta-amyrin 28-monooxygenase 
 sly-u.5   101250025   beta-amyrin 6-beta-monooxygenase 
 sot-r.1   102593623   beta-amyrin 28-oxidase-like 
 sot-r.1   102594160   beta-amyrin 28-oxidase-like 
 sot-r.1   102595905   beta-amyrin 28-oxidase-like 
 nta-r.1   107785337   beta-amyrin 6-beta-monooxygenase-like 
 nta-r.1   107831071   cytochrome P450 716B1 
 nta-r.1   107832734   beta-amyrin 6-beta-monooxygenase-like 
 osa-u.5   4343392   taxadiene 5-alpha hydroxylase 
 osa-u.5   4343396   cytochrome P450 716B1 
 osa-u.5   4343397   cytochrome P450 716B1 
 zma-u.5   100272916   putative cytochrome P450 superfamily protein 
 zma-u.5   100281925   taxane 10-beta-hydroxylase 
 zma-u.5   103626352   cytochrome P450 716A1 
 tae-r.2   123120658   cytochrome P450 716A1 
 tae-r.2   123100321   cytochrome P450 716A1 
 tae-r.2   123093352   cytochrome P450 716A1 
 hvu-r.1   123430772   cytochrome P450 716B1-like 
 hvu-r.1   123430135   cytochrome P450 716A1-like 
 sbi-r.1   8065117   cytochrome P450 716B1 
 sbi-r.1   8068319   cytochrome P450 716B1 
 sbi-r.1   8068807   cytochrome P450 716B1 
 bdi-r.1   100846787   cytochrome P450 716B1 
 bdi-r.1   100838753   cytochrome P450 716B1 

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Top 50 coexpressed genes to 7483231 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7483231 (ppo-u.5 coexpression data)

CoexMap""


ppoLOC127905233 | Entrez gene ID : 127905233    
Species ppo gma mtr ath vvi ghi cit sly sot nta osa zma tae hvu sbi bdi cre bra bna
Paralog 1 3 2 1 2 1 2 3 3 3 3 3 3 2 3 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function cytochrome P450 716B1-like
KEGG
GO BP
GO:0016125 [list] [network] sterol metabolic process  (95 genes)  IEA  
GO CC
GO MF
GO:0004497 [list] [network] monooxygenase activity  (372 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (388 genes)  IEA  
GO:0016705 [list] [network] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  (417 genes)  IEA  
GO:0020037 [list] [network] heme binding  (439 genes)  IEA  
Protein XP_052308356.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 2,  nucl 1,  cyto 1,  vacu 1,  cyto_nucl 1  (predict for XP_052308356.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_052308356.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7483231
gma-u.5
for
100815640
gma-u.5
for
100813159
gma-u.5
for
100808690
mtr-u.5
for
25491080
mtr-u.5
for
25491079
ath-u.5
for
CYP718
vvi-u.5
for
CYP716A15
vvi-u.5
for
100255495
ghi-r.1
for
107918223
cit-r.1
for
102624521
cit-r.1
for
102625960
sly-u.5
for
101251676
sly-u.5
for
101252702
sly-u.5
for
101250025
sot-r.1
for
102593623
sot-r.1
for
102594160
sot-r.1
for
102595905
nta-r.1
for
107785337
nta-r.1
for
107831071
nta-r.1
for
107832734
osa-u.5
for
4343392
osa-u.5
for
4343396
osa-u.5
for
4343397
zma-u.5
for
100272916
zma-u.5
for
100281925
zma-u.5
for
103626352
tae-r.2
for
123120658
tae-r.2
for
123100321
tae-r.2
for
123093352
hvu-r.1
for
123430772
hvu-r.1
for
123430135
sbi-r.1
for
8065117
sbi-r.1
for
8068319
sbi-r.1
for
8068807
bdi-r.1
for
100846787
bdi-r.1
for
100838753

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Ortholog ID: 337
Species ppo ppo gma gma mtr mtr ath vvi vvi cit cit sly sly sly sot sot sot nta nta osa osa osa zma zma zma tae hvu hvu sbi sbi sbi bdi
Symbol LOC7494429 LOC7479065 LOC100815640 LOC100813159 LOC25502252 LOC11427332 CYP716A2 LOC100255495 LOC100262400 LOC102624521 LOC102625960 LOC101251676 LOC101252702 LOC101267039 LOC102593623 LOC102595905 LOC102603547 LOC107831071 LOC107796228 LOC4343392 LOC4343391 LOC4346928 LOC100272916 LOC100281925 LOC103626352 LOC123120658 LOC123430772 LOC123425886 LOC8065117 LOC8080133 LOC8083007 LOC100838753
Function* beta-amyrin 6-beta-monooxygenase cytochrome P450 716B1 beta-amyrin 28-monooxygenase beta-amyrin 28-monooxygenase beta-amyrin 28-monooxygenase-like cytochrome P450 716B1 cytochrome P450, family 716, subfamily A, polypeptide 2 taxadiene 5-alpha hydroxylase beta-amyrin 28-monooxygenase taxadiene 5-alpha hydroxylase beta-amyrin 28-monooxygenase-like beta-amyrin 28-monooxygenase beta-amyrin 28-monooxygenase cytochrome P450 716B1-like beta-amyrin 28-oxidase-like beta-amyrin 28-oxidase-like beta-amyrin 28-oxidase-like cytochrome P450 716B1 beta-amyrin 28-monooxygenase-like taxadiene 5-alpha hydroxylase cytochrome P450 716B1 cytochrome P450 716A1 putative cytochrome P450 superfamily protein taxane 10-beta-hydroxylase cytochrome P450 716A1 cytochrome P450 716A1 cytochrome P450 716B1-like cytochrome P450 716B1-like cytochrome P450 716B1 taxadiene 5-alpha hydroxylase cytochrome P450 716B1 cytochrome P450 716B1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 9
ppo04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00999 Biosynthesis of various plant secondary metabolites 3
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
gma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00999 Biosynthesis of various plant secondary metabolites 3
mtr00460 Cyanoamino acid metabolism 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00999 Biosynthesis of various plant secondary metabolites 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 3
cit00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00053 Ascorbate and aldarate metabolism 3
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01240 Biosynthesis of cofactors 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 3
sot00940 Phenylpropanoid biosynthesis 2
sot02010 ABC transporters 2
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta00566 Sulfoquinovose metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 3
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 5
sbi01310 Nitrogen cycle 4
sbi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7494429 7479065 100815640 100813159 25502252 11427332 833611 100255495 100262400 102624521 102625960 101251676 101252702 101267039 102593623 102595905 102603547 107831071 107796228 4343392 4343391 4346928 100272916 100281925 103626352 123120658 123430772 123425886 8065117 8080133 8083007 100838753
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