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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463321   E3 ubiquitin-protein ligase RZFP34 
 ppo-u.5   7495732   probable E3 ubiquitin-protein ligase RZFP34 
 gma-u.5   100783915   probable E3 ubiquitin-protein ligase RZFP34 
 gma-u.5   100802067   E3 ubiquitin-protein ligase RZFP34 
 gma-u.5   100803569   probable E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   25483138   E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   11429978   probable E3 ubiquitin-protein ligase RZFP34 
 mtr-u.5   11412063   E3 ubiquitin-protein ligase RZFP34 
 ath-u.5   AT5G22920   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 ath-u.5   AT5G25560   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 vvi-u.5   100241783   E3 ubiquitin-protein ligase RZFP34 
 vvi-u.5   100252623   RING finger and CHY zinc finger domain-containing protein 1-like 
 vvi-u.5   100258546   E3 ubiquitin-protein ligase RZFP34 
 sly-u.5   101256801   RING finger and CHY zinc finger domain-containing protein 
 sly-u.5   101254223   probable E3 ubiquitin-protein ligase RZFP34 
 osa-u.5   4348796   E3 ubiquitin-protein ligase RZFP34 
 osa-u.5   4324695   probable E3 ubiquitin-protein ligase RZFP34 
 zma-u.5   100192978   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 zma-u.5   100280509   RING finger and CHY zinc finger domain-containing protein 1 
 zma-u.5   100192089   CHY-type/CTCHY-type/RING-type Zinc finger protein 

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Top 50 coexpressed genes to 7463321 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463321 (ppo-u.5 coexpression data)

CoexMap"127905460"


ppoLOC127905460 | Entrez gene ID : 127905460    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 3 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04120 [list] [network] Ubiquitin mediated proteolysis (184 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (340 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_052309748.1 [sequence] [blastp]
XP_052309749.1 [sequence] [blastp]
XP_052309750.1 [sequence] [blastp]
XP_052309751.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1,  plas 1,  extr 1  (predict for XP_052309748.1)
cyto 4,  nucl 4,  chlo 1,  plas 1,  extr 1  (predict for XP_052309749.1)
cyto 4,  nucl 4,  chlo 1,  plas 1,  extr 1  (predict for XP_052309750.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052309751.1)
Subcellular
localization
TargetP
other 7  (predict for XP_052309748.1)
other 7  (predict for XP_052309749.1)
other 7  (predict for XP_052309750.1)
other 7  (predict for XP_052309751.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463321

.
ppo-u.5
for
7495732

.
gma-u.5
for
100783915

.
gma-u.5
for
100802067

.
gma-u.5
for
100803569

.
mtr-u.5
for
25483138

.
mtr-u.5
for
11429978

.
mtr-u.5
for
11412063

.
ath-u.5
for
AT5G22920

.
ath-u.5
for
AT5G25560

.
vvi-u.5
for
100241783

.
vvi-u.5
for
100252623

.
vvi-u.5
for
100258546

.
sly-u.5
for
101256801

.
sly-u.5
for
101254223

.
osa-u.5
for
4348796

.
osa-u.5
for
4324695

.
zma-u.5
for
100192978

.
zma-u.5
for
100280509

.
zma-u.5
for
100192089

.


Ortholog ID: 2581
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G22920 AT5G25560 LOC100802067 LOC100783915 LOC101254223 LOC101256801 LOC4324695 LOC4348796 LOC100192089 LOC100280509 LOC103854743 LOC103856536 LOC100241783 LOC100252623 LOC7495732 LOC7463321 LOC11429978 LOC11412063 LOC123062052 LOC123070776 LOC123444288 LOC123430073 LOC121225246 LOC107948601 LOC106382650 LOC106419516 LOC110433580 LOC8070528 LOC102585180 LOC102582766 LOC102627698 LOC102624116 LOC100822563 LOC100826237 LOC107794025 LOC107817603
Function* CHY-type/CTCHY-type/RING-type Zinc finger protein CHY-type/CTCHY-type/RING-type Zinc finger protein E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 RING finger and CHY zinc finger domain-containing protein probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 CHY-type/CTCHY-type/RING-type Zinc finger protein RING finger and CHY zinc finger domain-containing protein 1 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 RING finger and CHY zinc finger domain-containing protein 1-like probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34-like probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase MIEL1-like E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 probable E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34 E3 ubiquitin-protein ligase RZFP34
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00052 Galactose metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00053 Ascorbate and aldarate metabolism 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 6
tae00650 Butanoate metabolism 3
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi00052 Galactose metabolism 2
ghi00430 Taurine and hypotaurine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 8
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna01200 Carbon metabolism 4
bna00071 Fatty acid degradation 4
bna00280 Valine, leucine and isoleucine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 3
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
cit00561 Glycerolipid metabolism 3
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 4
bdi04626 Plant-pathogen interaction 4
bdi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 4
bdi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04820 Cytoskeleton in muscle cells 2
nta04120 Ubiquitin mediated proteolysis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832356 832631 100802067 100783915 101254223 101256801 4324695 4348796 100192089 100280509 103854743 103856536 100241783 100252623 7495732 7463321 11429978 11412063 123062052 123070776 123444288 123430073 121225246 107948601 106382650 106419516 110433580 8070528 102585180 102582766 102627698 102624116 100822563 100826237 107794025 107817603
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