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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7470082   auxin-responsive protein IAA29 
 ppo-u.5   7474682   auxin-responsive protein IAA29 
 gma-u.5   100804096   auxin-responsive protein IAA13-like 
 gma-u.5   100802759   auxin-responsive protein IAA29-like 
 gma-u.5   100783359   auxin-responsive protein IAA28 
 ath-u.5   IAA29   indole-3-acetic acid inducible 29 
 bra-r.6   103851160   auxin-responsive protein IAA29 
 bra-r.6   103862115   auxin-responsive protein IAA29 
 vvi-u.5   104879021   auxin-responsive protein IAA28 
 ghi-r.1   107901319   auxin-responsive protein IAA20 
 ghi-r.1   107906873   auxin-responsive protein IAA29 
 ghi-r.1   107933180   auxin-responsive protein IAA29 
 bna-r.1   106369639   auxin-responsive protein IAA29-like 
 bna-r.1   106399310   auxin-responsive protein IAA29-like 
 cit-r.1   102617957   auxin-responsive protein IAA29 
 cit-r.1   102625468   auxin-responsive protein IAA29 
 sly-u.5   101055555   IAA35 
 sly-u.5   101055556   IAA36 
 sly-u.5   IAA29   auxin-responsive protein IAA29 
 sot-r.1   102583661   auxin-responsive protein IAA20-like 
 sot-r.1   102585622   auxin-responsive protein IAA29-like 
 sot-r.1   102602017   auxin-responsive protein IAA29-like 
 nta-r.1   107762242   auxin-responsive protein IAA28 
 nta-r.1   107767650   auxin-induced protein IAA6 
 nta-r.1   107813390   auxin-induced protein 22C 

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Top 50 coexpressed genes to 7470082 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7470082 (ppo-u.5 coexpression data)

CoexMap""


ppoLOC127905464 | Entrez gene ID : 127905464    
Species ppo gma ath bra vvi ghi bna cit sly sot nta tae bdi hvu mtr zma sbi osa cre
Paralog 2 3 1 2 1 3 2 2 3 3 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function auxin-responsive protein IAA29
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_052309777.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  extr 1,  cysk 1  (predict for XP_052309777.1)
Subcellular
localization
TargetP
other 6  (predict for XP_052309777.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7470082
ppo-u.5
for
7474682
gma-u.5
for
100804096
gma-u.5
for
100802759
gma-u.5
for
100783359
ath-u.5
for
IAA29
bra-r.6
for
103851160
bra-r.6
for
103862115
vvi-u.5
for
104879021
ghi-r.1
for
107901319
ghi-r.1
for
107906873
ghi-r.1
for
107933180
bna-r.1
for
106369639
bna-r.1
for
106399310
cit-r.1
for
102617957
cit-r.1
for
102625468
sly-u.5
for
101055555
sly-u.5
for
101055556
sly-u.5
for
IAA29
sot-r.1
for
102583661
sot-r.1
for
102585622
sot-r.1
for
102602017
nta-r.1
for
107762242
nta-r.1
for
107767650
nta-r.1
for
107813390

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Ortholog ID: 4962
Species ppo ppo gma gma ath bra bra vvi ghi ghi ghi bna bna cit cit sly sly sly sot sot sot nta nta nta
Symbol LOC7470082 LOC7474682 LOC100804096 LOC100802759 IAA29 LOC103851160 LOC103862115 LOC104879021 LOC107906873 LOC107942686 LOC107953686 LOC106369639 LOC106399310 LOC102617957 LOC102625468 LOC101055555 LOC101055556 IAA29 LOC102583661 LOC102585622 LOC102602017 LOC107813390 LOC107811613 LOC107779361
Function* auxin-responsive protein IAA29 auxin-responsive protein IAA29 auxin-responsive protein IAA13-like auxin-responsive protein IAA29-like indole-3-acetic acid inducible 29 auxin-responsive protein IAA29 auxin-responsive protein IAA29 auxin-responsive protein IAA28 auxin-responsive protein IAA29 auxin-responsive protein IAA9-like auxin-responsive protein IAA9-like auxin-responsive protein IAA29-like auxin-responsive protein IAA29-like auxin-responsive protein IAA29 auxin-responsive protein IAA29 IAA35 IAA36 auxin-responsive protein IAA29 auxin-responsive protein IAA20-like auxin-responsive protein IAA29-like auxin-responsive protein IAA29-like auxin-induced protein 22C auxin-responsive protein IAA29-like auxin-responsive protein IAA5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 10
gma00905 Brassinosteroid biosynthesis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
bna00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
bna00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 6
sly04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00905 Brassinosteroid biosynthesis 2
nta00062 Fatty acid elongation 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00905 Brassinosteroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7470082 7474682 100804096 100802759 829361 103851160 103862115 104879021 107906873 107942686 107953686 106369639 106399310 102617957 102625468 101055555 101055556 101055553 102583661 102585622 102602017 107813390 107811613 107779361
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