ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100258300	probable aldo-keto reductase 2
vvi-u.5	100246287	probable aldo-keto reductase 2
vvi-u.5	100241166	probable aldo-keto reductase 4
ath-u.5	AT1G10810	NAD(P)-linked oxidoreductase superfamily protein
ath-u.5	AT1G60680	NAD(P)-linked oxidoreductase superfamily protein
ath-u.5	AT1G60690	NAD(P)-linked oxidoreductase superfamily protein
gma-u.5	100779078	probable aldo-keto reductase 2
gma-u.5	100807798	probable aldo-keto reductase 2
gma-u.5	100779962	probable aldo-keto reductase 2
bra-r.6	103838498	probable aldo-keto reductase 4
bra-r.6	103829984	probable aldo-keto reductase 6
bra-r.6	103830009	probable aldo-keto reductase 6
ppo-u.5	7466325	probable aldo-keto reductase 2
ppo-u.5	7462435	probable aldo-keto reductase 2
ppo-u.5	7466192	probable aldo-keto reductase 2
mtr-u.5	11443832	probable aldo-keto reductase 2
mtr-u.5	11431456	probable aldo-keto reductase 2
mtr-u.5	11442908	probable aldo-keto reductase 2
ghi-r.1	107903787	probable aldo-keto reductase 2
ghi-r.1	107890522	probable aldo-keto reductase 2
ghi-r.1	107914717	probable aldo-keto reductase 2
bna-r.1	106366568	probable aldo-keto reductase 4
bna-r.1	111215724	probable aldo-keto reductase 6
bna-r.1	106366571	probable aldo-keto reductase 3
cit-r.1	102622901	probable aldo-keto reductase 2
cit-r.1	102622609	auxin-induced protein PCNT115-like
cit-r.1	102620391	probable aldo-keto reductase 2
sly-u.5	104649440	auxin-induced protein PCNT115-like
sly-u.5	104649444	aldo-keto reductase 2
sly-u.5	101266267	auxin-induced protein PCNT115
sot-r.1	102586699	auxin-induced protein PCNT115-like
sot-r.1	102604231	auxin-induced protein PCNT115-like
sot-r.1	102581138	auxin-induced protein PCNT115-like
nta-r.1	107767025	putative aldo-keto reductase 2
nta-r.1	107764954	auxin-induced protein PCNT115
nta-r.1	107823183	putative aldo-keto reductase 2
osa-u.5	4335515	probable aldo-keto reductase 3
osa-u.5	4335512	probable aldo-keto reductase 2
osa-u.5	4335510	probable aldo-keto reductase 2
zma-u.5	100273138	putative oxidoreductase, aldo/keto reductase family protein
zma-u.5	100383880	uncharacterized LOC100383880
zma-u.5	100282958	uncharacterized LOC100282958
tae-r.2	123117666	probable aldo-keto reductase 2
tae-r.2	123041538	probable aldo-keto reductase 3
tae-r.2	123045226	probable aldo-keto reductase 2
hvu-r.1	123426452	probable aldo-keto reductase 2
hvu-r.1	123426450	probable aldo-keto reductase 2
hvu-r.1	123426449	probable aldo-keto reductase 2
sbi-r.1	8073737	probable aldo-keto reductase 3
sbi-r.1	8068380	probable aldo-keto reductase 2
sbi-r.1	8084255	probable aldo-keto reductase 3
cre-r.1	CHLRE_11g467622v5	uncharacterized protein

Top 50 coexpressed genes to 100258300 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100258300 (vvi-u.5 coexpression data)

CoexMap"132253822"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(4496 genes)

IEA

GO MF

Protein

XP_059593004.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 2, chlo 1, mito 1, vacu 1, cysk 1, chlo_mito 1

(predict for XP_059593004.1)

Subcellular
localization
TargetP

other 7

(predict for XP_059593004.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100258300	vvi-u.5 for 100246287	vvi-u.5 for 100241166	ath-u.5 for AT1G10810	ath-u.5 for AT1G60680	ath-u.5 for AT1G60690	gma-u.5 for 100779078	gma-u.5 for 100807798	gma-u.5 for 100779962	bra-r.6 for 103838498	bra-r.6 for 103829984	bra-r.6 for 103830009	ppo-u.5 for 7466325	ppo-u.5 for 7462435	ppo-u.5 for 7466192	mtr-u.5 for 11443832	mtr-u.5 for 11431456	mtr-u.5 for 11442908	ghi-r.1 for 107903787	ghi-r.1 for 107890522	ghi-r.1 for 107914717	bna-r.1 for 106366568	bna-r.1 for 111215724	bna-r.1 for 106366571	cit-r.1 for 102622901	cit-r.1 for 102622609	cit-r.1 for 102620391	sly-u.5 for 104649440	sly-u.5 for 104649444	sly-u.5 for 101266267	sot-r.1 for 102586699	sot-r.1 for 102604231	sot-r.1 for 102581138	nta-r.1 for 107767025	nta-r.1 for 107764954	nta-r.1 for 107823183	osa-u.5 for 4335515	osa-u.5 for 4335512	osa-u.5 for 4335510	zma-u.5 for 100273138	zma-u.5 for 100383880	zma-u.5 for 100282958	tae-r.2 for 123117666	tae-r.2 for 123041538	tae-r.2 for 123045226	hvu-r.1 for 123426452	hvu-r.1 for 123426450	hvu-r.1 for 123426449	sbi-r.1 for 8073737	sbi-r.1 for 8068380	sbi-r.1 for 8084255	cre-r.1 for CHLRE_11g467622v5

Ortholog

Ortholog ID: 938

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

cre

Symbol

Function^*

probable aldo-keto reductase 2

probable aldo-keto reductase 4

probable aldo-keto reductase 2

NAD(P)-linked oxidoreductase superfamily protein

probable aldo-keto reductase 2

probable aldo-keto reductase 4

probable aldo-keto reductase 2

probable aldo-keto reductase 4

probable aldo-keto reductase 6

probable aldo-keto reductase 2

auxin-induced protein PCNT115-like

probable aldo-keto reductase 2

auxin-induced protein PCNT115

auxin-induced protein PCNT115-like

aldo-keto reductases superfamily protein

auxin-induced protein PCNT115-like

auxin-induced protein PCNT115

auxin-induced protein PCNT115-like

probable aldo-keto reductase 2

probable aldo-keto reductase 1

putative oxidoreductase, aldo/keto reductase family protein

uncharacterized LOC100383880

uncharacterized LOC100282958

probable aldo-keto reductase 3

probable aldo-keto reductase 2

probable aldo-keto reductase 3

probable aldo-keto reductase 2

probable aldo-keto reductase 3

probable aldo-keto reductase 2

probable aldo-keto reductase 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	8
vvi01200	Carbon metabolism	8
vvi01230	Biosynthesis of amino acids	7
vvi00710	Carbon fixation by Calvin cycle	3
vvi00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	7
vvi03040	Spliceosome	5
vvi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00920	Sulfur metabolism	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	5
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00943	Isoflavonoid biosynthesis	5
gma00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4
bra04145	Phagosome	2
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00902	Monoterpenoid biosynthesis	3
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00561	Glycerolipid metabolism	2
ppo00620	Pyruvate metabolism	2
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	4
ppo00620	Pyruvate metabolism	3
ppo00561	Glycerolipid metabolism	2
ppo01200	Carbon metabolism	2
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	5
cit00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	5
cit00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	3
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	11
sly00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00480	Glutathione metabolism	4
sot00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	4
nta00592	alpha-Linolenic acid metabolism	2
nta00061	Fatty acid biosynthesis	2
nta00780	Biotin metabolism	2
nta01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	3
nta00480	Glutathione metabolism	2
nta00730	Thiamine metabolism	2
nta00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	3
nta00592	alpha-Linolenic acid metabolism	2
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	9
osa00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
osa00940	Phenylpropanoid biosynthesis	4
osa00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
osa00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00073	Cutin, suberine and wax biosynthesis	2
osa04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00073	Cutin, suberine and wax biosynthesis	2
osa04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	4
zma01240	Biosynthesis of cofactors	3
zma00940	Phenylpropanoid biosynthesis	3
zma00061	Fatty acid biosynthesis	2
zma00780	Biotin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2
zma00051	Fructose and mannose metabolism	2
zma00562	Inositol phosphate metabolism	2
zma00710	Carbon fixation by Calvin cycle	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	5
tae00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	3
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	4
sbi00940	Phenylpropanoid biosynthesis	2
sbi00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	3
sbi00350	Tyrosine metabolism	2
sbi00950	Isoquinoline alkaloid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100246287

100241166

100251429

842362

842363

3767587

100779078

100807798

100779962

103838490

103838493

103838492

7466325

7462435

7466192

11443832

11431456

11442908

107903787

107890522

107914717

106366568

106366569

106366570

102622901

102622609

102630481

101266267

101264763

101250055

102586699

102581138

102605459

107775053

107816763

107775052

4335512

4335510

4335509

100273138

100383880

100282958

123041538

123053062

123189533

123426450

123426449

8073737

8068380

8084255

5724370

The preparation time of this page was 2.4 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	cre	bdi
Paralog	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100258300 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100258300 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**