ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100266519	auxin-binding protein ABP19a
ath-u.5	GER3	germin 3
gma-u.5	GER8	germin-like protein
gma-u.5	100816355	germin-like protein
gma-u.5	GER10	germin-like protein
bra-r.6	103831766	germin-like protein 1
bra-r.6	103851359	germin-like protein 1
bra-r.6	103851361	germin-like protein subfamily 3 member 3
ppo-u.5	18100345	auxin-binding protein ABP19a
ppo-u.5	112326879	auxin-binding protein ABP19a
ppo-u.5	7490946	auxin-binding protein ABP19a
mtr-u.5	25486501	auxin-binding protein ABP19a
mtr-u.5	11419921	auxin-binding protein ABP19b
mtr-u.5	11429465	germin-like protein subfamily 3 member 1
ghi-r.1	121206092	germin-like protein subfamily 3 member 1
ghi-r.1	107929957	auxin-binding protein ABP19a
ghi-r.1	107958787	auxin-binding protein ABP19a
bna-r.1	106425748	germin-like protein subfamily 3 member 3
bna-r.1	106353773	germin-like protein 1
bna-r.1	106354228	germin-like protein 1
cit-r.1	102627199	germin-like protein subfamily 3 member 1
sly-u.5	101254918	auxin-binding protein ABP19a
sly-u.5	101250583	auxin-binding protein ABP19a
sot-r.1	102594953	auxin-binding protein ABP19a-like
sot-r.1	102602789	auxin-binding protein ABP19a-like
sot-r.1	102587114	auxin-binding protein ABP19a
nta-r.1	107806690	auxin-binding protein ABP19a
nta-r.1	107770478	auxin-binding protein ABP19a-like
nta-r.1	107773727	auxin-binding protein ABP19a-like
osa-u.5	4345763	germin-like protein 8-14
zma-u.5	100272933	germin-like protein
tae-r.2	123152637	germin-like protein 8-14
tae-r.2	123051322	germin-like protein 8-14
tae-r.2	123043461	germin-like protein 8-14
hvu-r.1	123412900	germin-like protein 8-14
hvu-r.1	123429324	germin-like protein 8-14
sbi-r.1	8071226	germin-like protein 8-14
bdi-r.1	100824312	germin-like protein 8-14
bdi-r.1	100824617	germin-like protein 8-14

Top 50 coexpressed genes to 100266519 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100266519 (vvi-u.5 coexpression data)

CoexMap"132254037"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005618 [list] [network] cell wall

(205 genes)

IEA

GO MF

GO:0030145 [list] [network] manganese ion binding

(91 genes)

IEA

Protein

XP_059593732.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 2, cyto 1, E.R. 1, cyto_E.R. 1

(predict for XP_059593732.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_059593732.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100266519	ath-u.5 for GER3	gma-u.5 for GER8	gma-u.5 for 100816355	gma-u.5 for GER10	bra-r.6 for 103831766	bra-r.6 for 103851359	bra-r.6 for 103851361	ppo-u.5 for 18100345	ppo-u.5 for 112326879	ppo-u.5 for 7490946	mtr-u.5 for 25486501	mtr-u.5 for 11419921	mtr-u.5 for 11429465	ghi-r.1 for 121206092	ghi-r.1 for 107929957	ghi-r.1 for 107958787	bna-r.1 for 106425748	bna-r.1 for 106353773	bna-r.1 for 106354228	cit-r.1 for 102627199	sly-u.5 for 101254918	sly-u.5 for 101250583	sot-r.1 for 102594953	sot-r.1 for 102602789	sot-r.1 for 102587114	nta-r.1 for 107806690	nta-r.1 for 107770478	nta-r.1 for 107773727	osa-u.5 for 4345763	zma-u.5 for 100272933	tae-r.2 for 123152637	tae-r.2 for 123051322	tae-r.2 for 123043461	hvu-r.1 for 123412900	hvu-r.1 for 123429324	sbi-r.1 for 8071226	bdi-r.1 for 100824312	bdi-r.1 for 100824617

Ortholog

Ortholog ID: 1473

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC100266519

GER3

GER8

GER10

Function^*

auxin-binding protein ABP19a

germin 3

germin-like protein

germin-like protein 1

germin-like protein subfamily 3 member 3

germin-like protein 1

auxin-binding protein ABP19a

auxin-binding protein ABP19b

germin-like protein subfamily 3 member 1

auxin-binding protein ABP19a

germin-like protein subfamily 3 member 1

germin-like protein 1

germin-like protein subfamily 3 member 3

germin-like protein subfamily 3 member 1

auxin-binding protein ABP19a

auxin-binding protein ABP19a-like

auxin-binding protein ABP19a

auxin-binding protein ABP19a-like

auxin-binding protein ABP19a

germin-like protein 8-14

germin-like protein

germin-like protein 8-14

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00710	Carbon fixation by Calvin cycle	3
bra01200	Carbon metabolism	3
bra00010	Glycolysis / Gluconeogenesis	2
bra00030	Pentose phosphate pathway	2
bra00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00902	Monoterpenoid biosynthesis	5
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	8
ghi01200	Carbon metabolism	4
ghi00710	Carbon fixation by Calvin cycle	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	2
cit04517	IgSF CAM signaling	2
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2
nta00261	Monobactam biosynthesis	2
nta00450	Selenocompound metabolism	2
nta00920	Sulfur metabolism	2
nta01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00460	Cyanoamino acid metabolism	2
zma00500	Starch and sucrose metabolism	2
zma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	5
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	11
tae00710	Carbon fixation by Calvin cycle	11
tae01200	Carbon metabolism	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	5
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00710	Carbon fixation by Calvin cycle	7
hvu01200	Carbon metabolism	7
hvu00630	Glyoxylate and dicarboxylate metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100266519

832185

100500326

100806553

100800387

103830785

103856454

103845660

18100345

112326879

7490946

25486501

11419921

11429465

107958787

107891727

106406175

106405935

106434866

102627199

101254918

101250583

102594953

102602789

102587114

107773727

107781399

107784278

4345763

100272933

123051322

123187274

542989

123412900

123429324

8071226

100824312

100824617

The preparation time of this page was 0.2 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	3	3	3	3	3	3	1	2	3	3	1	1	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100266519 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100266519 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**