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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100264982   scarecrow-like protein 30 
 vvi-u.5   100241120   scarecrow-like protein 14 
 ath-u.5   AT2G37650   GRAS family transcription factor 
 ath-u.5   AT3G46600   GRAS family transcription factor 
 ath-u.5   AT5G59450   GRAS family transcription factor 
 gma-u.5   100807788   scarecrow-like protein 9 
 gma-u.5   100801824   scarecrow-like protein 9 
 gma-u.5   100796903   scarecrow-like protein 14 
 bra-r.6   103845369   scarecrow-like protein 11 
 bra-r.6   103836438   scarecrow-like protein 14 
 bra-r.6   103873732   scarecrow-like protein 30 
 ppo-u.5   7485697   scarecrow-like protein 33 
 ppo-u.5   7481529   scarecrow-like protein 14 
 ppo-u.5   7467554   scarecrow-like protein 9 
 mtr-u.5   11414015   scarecrow-like protein 14 
 mtr-u.5   25498496   scarecrow-like protein 9 
 mtr-u.5   25487898   scarecrow-like protein 30 
 ghi-r.1   107885982   scarecrow-like protein 30 
 ghi-r.1   107885984   scarecrow-like protein 14 
 ghi-r.1   107885986   scarecrow-like protein 33 
 bna-r.1   111208569   scarecrow-like protein 14 
 bna-r.1   106415461   scarecrow-like protein 30 
 bna-r.1   106418387   scarecrow-like protein 11 
 cit-r.1   102621708   scarecrow-like protein 30 
 cit-r.1   102622070   scarecrow-like protein 9 
 sly-u.5   101247176   scarecrow-like protein 9 
 sly-u.5   101246637   scarecrow-like protein 14 
 sly-u.5   GRAS4   GRAS4 
 sot-r.1   102606191   scarecrow-like protein 14 
 sot-r.1   102585418   scarecrow-like protein 14 
 sot-r.1   102600423   scarecrow-like protein 9 
 nta-r.1   107771234   scarecrow-like protein 14 
 nta-r.1   107818913   scarecrow-like protein 30 
 nta-r.1   107810170   scarecrow-like protein 9 
 osa-u.5   4327499   scarecrow-like protein 9 
 osa-u.5   4336820   scarecrow-like protein 9 
 zma-u.5   103644258   scarecrow-like protein 30 
 zma-u.5   100381402   uncharacterized LOC100381402 
 tae-r.2   123071381   scarecrow-like protein 9 
 tae-r.2   123120446   scarecrow-like protein 9 
 tae-r.2   123114011   scarecrow-like protein 30 
 hvu-r.1   123400070   scarecrow-like protein 9 
 sbi-r.1   8057357   scarecrow-like protein 30 
 sbi-r.1   8058890   scarecrow-like protein 9 
 bdi-r.1   100824633   scarecrow-like protein 9 
 bdi-r.1   100843948   scarecrow-like protein 9 

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Top 50 coexpressed genes to 100264982 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100264982 (vvi-u.5 coexpression data)

CoexMap"132254944"


vviLOC132254944 | Entrez gene ID : 132254944    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 3 3 3 3 3 3 2 3 3 3 2 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (598 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
Protein XP_059598040.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  pero 1,  chlo_mito 1,  nucl_plas 1,  mito_plas 1  (predict for XP_059598040.1)
Subcellular
localization
TargetP
other 9  (predict for XP_059598040.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100264982
vvi-u.5
for
100241120
ath-u.5
for
AT2G37650
ath-u.5
for
AT3G46600
ath-u.5
for
AT5G59450
gma-u.5
for
100807788
gma-u.5
for
100801824
gma-u.5
for
100796903
bra-r.6
for
103845369
bra-r.6
for
103836438
bra-r.6
for
103873732
ppo-u.5
for
7485697
ppo-u.5
for
7481529
ppo-u.5
for
7467554
mtr-u.5
for
11414015
mtr-u.5
for
25498496
mtr-u.5
for
25487898
ghi-r.1
for
107885982
ghi-r.1
for
107885984
ghi-r.1
for
107885986
bna-r.1
for
111208569
bna-r.1
for
106415461
bna-r.1
for
106418387
cit-r.1
for
102621708
cit-r.1
for
102622070
sly-u.5
for
101247176
sly-u.5
for
101246637
sly-u.5
for
GRAS4
sot-r.1
for
102606191
sot-r.1
for
102585418
sot-r.1
for
102600423
nta-r.1
for
107771234
nta-r.1
for
107818913
nta-r.1
for
107810170
osa-u.5
for
4327499
osa-u.5
for
4336820
zma-u.5
for
103644258
zma-u.5
for
100381402
tae-r.2
for
123071381
tae-r.2
for
123120446
tae-r.2
for
123114011
hvu-r.1
for
123400070
sbi-r.1
for
8057357
sbi-r.1
for
8058890
bdi-r.1
for
100824633
bdi-r.1
for
100843948


Ortholog ID: 352
Species vvi vvi ath ath ath gma gma gma bra bra bra ppo ppo ppo mtr mtr mtr ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa zma zma sbi sbi sbi bdi bdi
Symbol LOC100264982 LOC100252795 AT3G46600 SCL14 AT2G29065 LOC100807788 LOC100801824 LOC121173030 LOC103836438 LOC103873732 LOC103857726 LOC7485697 LOC7467554 LOC7487261 LOC25487898 LOC25487897 LOC25487896 LOC107900465 LOC107906564 LOC106420491 LOC106376460 LOC125601294 LOC102621708 LOC102622070 LOC102623679 LOC101246721 LOC101249397 LOC101256274 LOC102606191 LOC102585418 LOC102598749 LOC107806277 LOC107802916 LOC107826445 LOC4327499 LOC4336820 LOC103644258 LOC100216906 LOC8057357 LOC8058890 LOC8064560 LOC100824633 LOC104581531
Function* scarecrow-like protein 30 scarecrow-like protein 9 GRAS family transcription factor SCARECROW-like 14 GRAS family transcription factor scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 31 scarecrow-like protein 14 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 33 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 30 scarecrow-like protein 11 scarecrow-like protein 30 scarecrow-like protein 30 scarecrow-like protein 33 scarecrow-like protein 11 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 33 scarecrow-like protein 14 scarecrow-like protein 9 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 30 uncharacterized LOC100216906 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 7
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
vvi00010 Glycolysis / Gluconeogenesis 3
vvi01200 Carbon metabolism 3
vvi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra03018 RNA degradation 3
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 6
bna04075 Plant hormone signal transduction 6
bna03250 Viral life cycle - HIV-1 4
bna03272 Virion - Hepatitis viruses 4
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04075 Plant hormone signal transduction 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 9
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 4
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100264982 100252795 823813 837267 10723125 100807788 100801824 121173030 103836438 103873732 103857726 7485697 7467554 7487261 25487898 25487897 25487896 107900465 107906564 106420491 106376460 125601294 102621708 102622070 102623679 101246721 101249397 101256274 102606191 102585418 102598749 107806277 107802916 107826445 4327499 4336820 103644258 100216906 8057357 8058890 8064560 100824633 104581531
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