ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4348995	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
osa-u.5	4337408	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
osa-u.5	4327835	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
zma-u.5	100384397	uncharacterized LOC100384397
zma-u.5	103645759	katanin p80 WD40 repeat-containing subunit B1 homolog
zma-u.5	103642198	katanin p80 WD40 repeat-containing subunit B1 homolog
ath-u.5	AT5G08390	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT5G23430	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G11160	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100803487	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2
gma-u.5	100788097	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3
sly-u.5	101261287	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1
sly-u.5	101258313	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
sly-u.5	101249258	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
vvi-u.5	100262947	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
vvi-u.5	100261609	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2
ppo-u.5	18102977	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3
ppo-u.5	7468474	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
ppo-u.5	7497764	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
mtr-u.5	11430367	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
mtr-u.5	25495081	katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4

Top 50 coexpressed genes to 4348995 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4348995 (osa-u.5 coexpression data)

CoexMap"136355351"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007019 [list] [network] microtubule depolymerization

(6 genes)

IEA

GO CC

GO:0008352 [list] [network] katanin complex

(4 genes)

IEA

GO MF

GO:0008017 [list] [network] microtubule binding

(147 genes)

IEA

Protein

XP_066163950.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, E.R. 2

(predict for XP_066163950.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_066163950.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4348995	osa-u.5 for 4337408	osa-u.5 for 4327835	zma-u.5 for 100384397	zma-u.5 for 103645759	zma-u.5 for 103642198	ath-u.5 for AT5G08390	ath-u.5 for AT5G23430	ath-u.5 for AT1G11160	gma-u.5 for 100803487	gma-u.5 for 100788097	sly-u.5 for 101261287	sly-u.5 for 101258313	sly-u.5 for 101249258	vvi-u.5 for 100262947	vvi-u.5 for 100261609	ppo-u.5 for 18102977	ppo-u.5 for 7468474	ppo-u.5 for 7497764	mtr-u.5 for 11430367	mtr-u.5 for 25495081

Ortholog

Ortholog ID: 1185

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like

katanin p80 WD40 repeat-containing subunit B1 homolog

Transducin/WD40 repeat-like superfamily protein

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1

katanin p80 WD40 repeat-containing subunit B1 homolog

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4

katanin p80 WD40 repeat-containing subunit B1 homolog

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like

katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00511	Other glycan degradation	3
tae00600	Sphingolipid metabolism	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00561	Glycerolipid metabolism	2
hvu00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00760	Nicotinate and nicotinamide metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00562	Inositol phosphate metabolism	2
ath04070	Phosphatidylinositol signaling system	2
ath04144	Endocytosis	2
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	7
ppo04145	Phagosome	3
ppo04517	IgSF CAM signaling	3
ppo00053	Ascorbate and aldarate metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	4
mtr04142	Lysosome	3
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna04120	Ubiquitin mediated proteolysis	2
bna04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	7
bna04144	Endocytosis	4
bna04517	IgSF CAM signaling	4
bna05100	Bacterial invasion of epithelial cells	4
bna04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03082	ATP-dependent chromatin remodeling	3

Expression

Expression pattern

Entrez Gene ID^*

4337408

123191043

123071001

123432212

123444565

100821384

100840374

103643412

103645759

8067101

8076464

830737

837657

100776214

101258313

101261287

103865498

103830433

100262947

100261609

7497764

7468474

25495081

11430367

107900972

107891791

106392874

106348331

102601996

102581300

102619160

102610343

107793987

107771488

5722989

The preparation time of this page was 0.9 [sec].


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	3	3	2	3	2	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4348995 (osa-u.5 coexpression data)

Top 50 enrichment test to 4348995 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**