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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   107276247   transcription factor MYB36 
 osa-u.5   4324664   transcription repressor MYB5 
 osa-u.5   4327303   transcription factor RAX2 
 tae-r.2   123058499   transcription factor RAX2 
 hvu-r.1   123440106   transcription factor RAX2-like 
 hvu-r.1   123452423   transcription factor MYB4-like 
 bdi-r.1   100834402   transcription factor MYB4 
 bdi-r.1   100835199   transcription factor RAX1 
 zma-u.5   103651344   transcription factor MYB4 
 zma-u.5   109944008   transcription factor RAX2 
 zma-u.5   103644077   transcription factor RAX3 
 ath-u.5   MYB68   myb domain protein 68 
 ath-u.5   MYB36   myb domain protein 36 
 ath-u.5   MYB84   myb domain protein 84 
 gma-u.5   100779919   transcription factor RAX2-like 
 gma-u.5   100817747   transcription factor RAX2 
 sly-u.5   101254107   transcription factor MYB36 
 sly-u.5   101263789   transcription factor MYB36-like 
 bra-r.6   103874017   transcription factor RAX3 
 bra-r.6   103837594   transcription factor RAX3 
 bra-r.6   103851700   transcription factor MYB36-like 
 vvi-u.5   100267549   transcription factor RAX2 
 mtr-u.5   25487864   transcription factor RAX2 
 mtr-u.5   25490005   transcription factor RAX3 
 mtr-u.5   25492386   transcription factor RAX2 
 ghi-r.1   107934684   transcription factor RAX3 
 ghi-r.1   107886806   transcription factor MYB36-like 
 bna-r.1   106454697   transcription factor RAX2 
 bna-r.1   106394840   transcription factor RAX2 
 sot-r.1   102587150   transcription factor RAX1 
 sot-r.1   102605776   transcription factor RAX2 
 cit-r.1   102616386   transcription factor MYB87-like 
 nta-r.1   107805786   uncharacterized LOC107805786 
 nta-r.1   107821759   uncharacterized LOC107821759 
 nta-r.1   107816569   transcription factor MYB35-like 

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Top 50 coexpressed genes to 107276247 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107276247 (osa-u.5 coexpression data)

CoexMap""


osaLOC136355946 | Entrez gene ID : 136355946    
Species osa tae hvu bdi zma ath gma sly bra vvi mtr ghi bna sot cit nta cre ppo sbi
Paralog 3 1 2 2 3 3 2 2 3 1 3 2 2 2 1 3 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function transcription factor RAX2-like
KEGG
GO BP
GO CC
GO MF
Protein XP_066165350.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for XP_066165350.1)
Subcellular
localization
TargetP
other 9  (predict for XP_066165350.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
107276247
osa-u.5
for
4324664
osa-u.5
for
4327303
tae-r.2
for
123058499
hvu-r.1
for
123440106
hvu-r.1
for
123452423
bdi-r.1
for
100834402
bdi-r.1
for
100835199
zma-u.5
for
103651344
zma-u.5
for
109944008
zma-u.5
for
103644077
ath-u.5
for
MYB68
ath-u.5
for
MYB36
ath-u.5
for
MYB84
gma-u.5
for
100779919
gma-u.5
for
100817747
sly-u.5
for
101254107
sly-u.5
for
101263789
bra-r.6
for
103874017
bra-r.6
for
103837594
bra-r.6
for
103851700
vvi-u.5
for
100267549
mtr-u.5
for
25487864
mtr-u.5
for
25490005
mtr-u.5
for
25492386
ghi-r.1
for
107934684
ghi-r.1
for
107886806
bna-r.1
for
106454697
bna-r.1
for
106394840
sot-r.1
for
102587150
sot-r.1
for
102605776
cit-r.1
for
102616386
nta-r.1
for
107805786
nta-r.1
for
107821759
nta-r.1
for
107816569

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Ortholog ID: 174
Species osa osa hvu bdi bdi bdi zma zma sbi sbi ath ath ath gma sly bra bra bra vvi mtr mtr mtr ghi ghi ghi bna bna sot sot cit nta nta nta
Symbol LOC4324664 LOC4339548 LOC123452423 LOC100834402 LOC100831769 LOC100837419 LOC103651344 LOC100272412 LOC8066610 LOC8074564 MYB36 MYB84 RAX2 LOC100800290 LOC101263789 LOC103856743 LOC103873034 LOC103867245 LOC100267549 LOC25493540 LOC25482026 LOC25482019 LOC107929872 LOC107938316 LOC107958549 LOC106413853 LOC106444822 LOC102587150 LOC102596369 LOC102616386 LOC142166818 LOC107808818 LOC107785742
Function* transcription repressor MYB5 transcription factor MYB8 transcription factor MYB4-like transcription factor MYB4 transcription factor RAX2 transcription factor RAX3 transcription factor MYB4 uncharacterized LOC100272412 transcription factor RAX2 transcription factor RAX1 myb domain protein 36 myb domain protein 84 Duplicated homeodomain-like superfamily protein transcription factor RAX3 transcription factor MYB36-like transcription factor MYB36 transcription factor RAX3 transcription factor RAX2 transcription factor RAX2 transcription factor RAX3 transcription factor RAX3 transcription factor MYB36 transcription factor MYB36 transcription factor RAX3-like transcription factor RAX2 transcription factor RAX3-like transcription factor RAX3-like transcription factor RAX1 transcription factor RAX2-like transcription factor MYB87-like transcription factor RAX3-like uncharacterized LOC107808818 transcription factor RAX3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 5
sbi04016 MAPK signaling pathway - plant 2
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00941 Flavonoid biosynthesis 2
sbi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 6
sly00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00500 Starch and sucrose metabolism 2
bra00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 8
ghi00941 Flavonoid biosynthesis 4
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot02010 ABC transporters 2
sot04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 4
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4324664 4339548 123452423 100834402 100831769 100837419 103651344 100272412 8066610 8074564 835866 824131 818262 100800290 101263789 103856743 103873034 103867245 100267549 25493540 25482026 25482019 107929872 107938316 107958549 106413853 106444822 102587150 102596369 102616386 142166818 107808818 107785742
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