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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   ELIP   early light inducible protein 
 sot-r.1   102598592   early light-induced protein, chloroplastic-like 
 nta-r.1   107823250   early light-induced protein 1, chloroplastic 
 nta-r.1   107824752   early light-induced protein, chloroplastic 
 nta-r.1   107800411   early light-induced protein, chloroplastic 
 ath-u.5   ELIP1   Chlorophyll A-B binding family protein 
 ath-u.5   ELIP2   Chlorophyll A-B binding family protein 
 gma-u.5   100306375   chlorophyll A-B binding protein 
 gma-u.5   ELIP   early light-induced protein 
 bra-r.6   103871843   early light-induced protein 2, chloroplastic 
 bra-r.6   103859976   early light-induced protein 1, chloroplastic 
 bra-r.6   103834289   early light-induced protein 1, chloroplastic 
 vvi-u.5   100263179   chloroplast ELIP early light-induced protein 
 ppo-u.5   18101574   early light-induced protein 1, chloroplastic 
 ppo-u.5   7473430   early light-induced protein 1, chloroplastic 
 mtr-u.5   25485116   early light-induced protein, chloroplastic 
 mtr-u.5   25485135   early light-induced protein, chloroplastic 
 mtr-u.5   25485138   early light-induced protein, chloroplastic 
 ghi-r.1   107928504   early light-induced protein 1, chloroplastic 
 ghi-r.1   107929077   early light-induced protein 1, chloroplastic 
 ghi-r.1   107929015   early light-induced protein 1, chloroplastic 
 bna-r.1   106369189   early light-induced protein 2, chloroplastic 
 bna-r.1   106367694   early light-induced protein 1, chloroplastic 
 bna-r.1   125600450   secreted acidic protein 2-like 
 cit-r.1   102578039   early light-induced protein 1, chloroplastic 
 cit-r.1   102626141   early light-induced protein 1, chloroplastic 
 osa-u.5   4342551   low molecular mass early light-inducible protein HV60, chloroplastic 
 zma-u.5   541918   early light-inducible protein ELIP 
 zma-u.5   100285817   early light-induced protein 
 tae-r.2   123150377   low molecular mass early light-inducible protein HV90, chloroplastic 
 tae-r.2   123158931   low molecular mass early light-inducible protein HV90, chloroplastic 
 hvu-r.1   123413393   high molecular mass early light-inducible protein HV58, chloroplastic-like 
 hvu-r.1   123446703   high molecular mass early light-inducible protein HV58, chloroplastic-like 
 hvu-r.1   123413402   high molecular mass early light-inducible protein HV58, chloroplastic-like 
 sbi-r.1   8060733   low molecular mass early light-inducible protein HV90, chloroplastic 
 sbi-r.1   8081192   low molecular mass early light-inducible protein HV90, chloroplastic 
 bdi-r.1   100838722   low molecular mass early light-inducible protein HV90, chloroplastic 
 bdi-r.1   100839629   low molecular mass early light-inducible protein HV90, chloroplastic 
 bdi-r.1   100839329   low molecular mass early light-inducible protein HV90, chloroplastic 
 cre-r.1   CHLRE_16g679250v5   uncharacterized protein 
 cre-r.1   CHLRE_09g394325v5   uncharacterized protein 
 cre-r.1   CHLRE_09g393173v5   uncharacterized protein 

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Top 50 coexpressed genes to ELIP (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ELIP (sly-u.5 coexpression data)

CoexMap"138337022"


slyLOC138337022 | Entrez gene ID : 138337022    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 3 2 2 3 1 2 3 3 3 2 1 2 2 3 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_025888478.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for XP_025888478.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_025888478.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
ELIP
sot-r.1
for
102598592
nta-r.1
for
107823250
nta-r.1
for
107824752
nta-r.1
for
107800411
ath-u.5
for
ELIP1
ath-u.5
for
ELIP2
gma-u.5
for
100306375
gma-u.5
for
ELIP
bra-r.6
for
103871843
bra-r.6
for
103859976
bra-r.6
for
103834289
vvi-u.5
for
100263179
ppo-u.5
for
18101574
ppo-u.5
for
7473430
mtr-u.5
for
25485116
mtr-u.5
for
25485135
mtr-u.5
for
25485138
ghi-r.1
for
107928504
ghi-r.1
for
107929077
ghi-r.1
for
107929015
bna-r.1
for
106369189
bna-r.1
for
106367694
bna-r.1
for
125600450
cit-r.1
for
102578039
cit-r.1
for
102626141
osa-u.5
for
4342551
zma-u.5
for
541918
zma-u.5
for
100285817
tae-r.2
for
123150377
tae-r.2
for
123158931
hvu-r.1
for
123413393
hvu-r.1
for
123446703
hvu-r.1
for
123413402
sbi-r.1
for
8060733
sbi-r.1
for
8081192
bdi-r.1
for
100838722
bdi-r.1
for
100839629
bdi-r.1
for
100839329
cre-r.1
for
CHLRE_16g679250v5
cre-r.1
for
CHLRE_09g394325v5
cre-r.1
for
CHLRE_09g393173v5


Ortholog ID: 621
Species sly sot nta nta nta ath ath gma gma bra bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa osa zma zma tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre cre
Symbol ELIP LOC102598592 LOC107823250 LOC107824752 LOC107800411 ELIP1 ELIP2 LOC100306375 ELIP LOC103871843 LOC103859976 LOC103868967 LOC100263179 LOC18101574 LOC7473430 LOC25485116 LOC25485135 LOC25485134 LOC107928504 LOC107929015 LOC107928556 LOC125594199 LOC106372735 LOC106400292 LOC102578039 LOC102626141 LOC4342551 LOC4342552 LOC4326757 LOC541918 LOC100285817 LOC123095053 LOC123171846 LOC123398192 LOC123399771 LOC123399770 LOC8060733 LOC8081192 LOC100838722 LOC100839024 LOC100835181 CHLRE_16g679250v5 CHLRE_09g393173v5 CHLRE_14g626750v5
Function* early light inducible protein early light-induced protein, chloroplastic-like early light-induced protein 1, chloroplastic early light-induced protein, chloroplastic early light-induced protein, chloroplastic Chlorophyll A-B binding family protein Chlorophyll A-B binding family protein chlorophyll A-B binding protein early light-induced protein early light-induced protein 2, chloroplastic early light-induced protein 1, chloroplastic early light-induced protein 1, chloroplastic chloroplast ELIP early light-induced protein early light-induced protein 1, chloroplastic early light-induced protein 1, chloroplastic early light-induced protein, chloroplastic early light-induced protein, chloroplastic early light-induced protein, chloroplastic early light-induced protein 1, chloroplastic early light-induced protein 1, chloroplastic early light-induced protein 1, chloroplastic early light-induced protein 1, chloroplastic-like early light-induced protein 2, chloroplastic early light-induced protein 1, chloroplastic early light-induced protein 1, chloroplastic early light-induced protein 1, chloroplastic low molecular mass early light-inducible protein HV60, chloroplastic low molecular mass early light-inducible protein HV60, chloroplastic low molecular mass early light-inducible protein HV60, chloroplastic early light-inducible protein ELIP early light-induced protein high molecular mass early light-inducible protein HV58, chloroplastic high molecular mass early light-inducible protein HV58, chloroplastic low molecular mass early light-inducible protein HV90, chloroplastic-like low molecular mass early light-inducible protein HV90, chloroplastic-like low molecular mass early light-inducible protein HV90, chloroplastic-like low molecular mass early light-inducible protein HV90, chloroplastic low molecular mass early light-inducible protein HV90, chloroplastic low molecular mass early light-inducible protein HV90, chloroplastic low molecular mass early light-inducible protein HV90, chloroplastic high molecular mass early light-inducible protein HV58, chloroplastic uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00999 Biosynthesis of various plant secondary metabolites 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 3
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
vvi03018 RNA degradation 2
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 11
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101257109 102598592 107823250 107824752 107800411 821855 827119 100306375 547896 103871843 103859976 103868967 100263179 18101574 7473430 25485116 25485135 25485134 107928504 107929015 107928556 125594199 106372735 106400292 102578039 102626141 4342551 4342552 4326757 541918 100285817 123095053 123171846 123398192 123399771 123399770 8060733 8081192 100838722 100839024 100835181 5721534 5720267 5718390
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