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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257809   probable E3 ubiquitin ligase SUD1 
 ath-u.5   CER9   RING/U-box superfamily protein 
 gma-u.5   100813205   probable E3 ubiquitin ligase SUD1 
 gma-u.5   100811171   probable E3 ubiquitin ligase SUD1 
 vvi-u.5   100262331   probable E3 ubiquitin ligase SUD1 
 vvi-u.5   100252430   probable E3 ubiquitin ligase SUD1 
 ppo-u.5   7457544   probable E3 ubiquitin ligase SUD1 
 ppo-u.5   7465030   probable E3 ubiquitin ligase SUD1 
 mtr-u.5   11441397   probable E3 ubiquitin ligase SUD1 
 osa-u.5   4341618   probable E3 ubiquitin ligase SUD1 
 zma-u.5   103638745   probable E3 ubiquitin ligase SUD1 
 zma-u.5   100501213   probable E3 ubiquitin ligase SUD1 

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Top 50 coexpressed genes to 101257809 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257809 (sly-u.5 coexpression data)

CoexMap"138341835"


slyLOC138341835 | Entrez gene ID : 138341835    
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 2 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (235 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
Protein XP_069149884.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 2  (predict for XP_069149884.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_069149884.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257809

.
ath-u.5
for
CER9

.
gma-u.5
for
100813205

.
gma-u.5
for
100811171

.
vvi-u.5
for
100262331

.
vvi-u.5
for
100252430

.
ppo-u.5
for
7457544

.
ppo-u.5
for
7465030

.
mtr-u.5
for
11441397

.
osa-u.5
for
4341618

.
zma-u.5
for
103638745

.
zma-u.5
for
100501213

.


Ortholog ID: 6631
Species ath gma gma sly osa zma zma vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol CER9 LOC100813205 LOC100811171 LOC101257809 LOC4341618 LOC103638745 LOC100501213 LOC100252430 LOC100262331 LOC7457544 LOC7465030 LOC11441397 LOC123149596 LOC123168302 LOC123413239 LOC107894288 LOC107908894 LOC106441984 LOC8067695 LOC102585474 LOC102617124 LOC100827964 LOC107784552 LOC107795085
Function* RING/U-box superfamily protein probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 probable E3 ubiquitin ligase SUD1 putative E3 ubiquitin ligase SUD1 putative E3 ubiquitin ligase SUD1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi02010 ABC transporters 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi02010 ABC transporters 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna00270 Cysteine and methionine metabolism 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00061 Fatty acid biosynthesis 2
nta00071 Fatty acid degradation 2
nta01212 Fatty acid metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829556 100813205 100811171 101257809 4341618 103638745 100501213 100252430 100262331 7457544 7465030 11441397 123149596 123168302 123413239 107894288 107908894 106441984 8067695 102585474 102617124 100827964 107784552 107795085
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