ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101248209	histone H4
sly-u.5	101252889	histone H4
sly-u.5	101256351	histone H4
sot-r.1	102597419	histone H4
sot-r.1	102590298	histone H4
sot-r.1	102590781	uncharacterized LOC102590781
nta-r.1	107773508	histone H4
nta-r.1	107764046	histone H4
nta-r.1	107777308	histone H4
ath-u.5	AT5G59690	Histone superfamily protein
ath-u.5	AT1G07820	Histone superfamily protein
ath-u.5	AT1G07660	Histone superfamily protein
gma-u.5	100818211	histone H4
gma-u.5	100805597	histone H4
gma-u.5	100305586	histone H4
bra-r.6	103841295	histone H4
bra-r.6	103843434	histone H4
vvi-u.5	100244527	uncharacterized LOC100244527
vvi-u.5	100267358	histone H4
vvi-u.5	100263191	histone H4
ppo-u.5	18100499	histone H4
ppo-u.5	7488974	histone H4
ppo-u.5	7495538	histone H4
mtr-u.5	25490772	uncharacterized LOC25490772
mtr-u.5	11446478	histone H4
mtr-u.5	25497863	histone H4
ghi-r.1	121225368	histone H4
ghi-r.1	121225377	histone H4
bna-r.1	106451040	histone H4
bna-r.1	106447366	histone H4
bna-r.1	106446920	histone H4
cit-r.1	102629767	histone H4
cit-r.1	102630591	histone H4
cit-r.1	102614670	histone H4
osa-u.5	4330345	histone H4
osa-u.5	9270544	histone H4
osa-u.5	4331427	histone H4
zma-u.5	100278340	uncharacterized LOC100278340
zma-u.5	100282268	uncharacterized LOC100282268
zma-u.5	103631010	histone H4
tae-r.2	123093840	histone H4
tae-r.2	123051161	histone H4
tae-r.2	123049796	histone H4
hvu-r.1	123403735	histone H4
hvu-r.1	123397931	histone H4
hvu-r.1	123427637	histone H4
sbi-r.1	8056569	histone H4
sbi-r.1	8058810	histone H4
sbi-r.1	8078508	histone H4
bdi-r.1	100824697	histone H4
bdi-r.1	104584388	histone H4
bdi-r.1	100845127	histone H4
cre-r.1	CHLRE_06g265450v5	uncharacterized protein
cre-r.1	CHLRE_06g265200v5	uncharacterized protein
cre-r.1	CHLRE_17g714600v5	uncharacterized protein

Top 50 coexpressed genes to 101248209 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101248209 (sly-u.5 coexpression data)

CoexMap"138349082"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006334 [list] [network] nucleosome assembly

(45 genes)

IEA

GO CC

GO:0000786 [list] [network] nucleosome

(80 genes)

IEA

GO MF

GO:0030527 [list] [network] structural constituent of chromatin	(65 genes)	IEA
GO:0046982 [list] [network] protein heterodimerization activity	(125 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1883 genes)	IEA

Protein

XP_069155038.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3

(predict for XP_069155038.1)

Subcellular
localization
TargetP

other 4, mito 3

(predict for XP_069155038.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101248209	sly-u.5 for 101252889	sly-u.5 for 101256351	sot-r.1 for 102597419	sot-r.1 for 102590298	sot-r.1 for 102590781	nta-r.1 for 107773508	nta-r.1 for 107764046	nta-r.1 for 107777308	ath-u.5 for AT5G59690	ath-u.5 for AT1G07820	ath-u.5 for AT1G07660	gma-u.5 for 100818211	gma-u.5 for 100805597	gma-u.5 for 100305586	bra-r.6 for 103841295	bra-r.6 for 103843434	vvi-u.5 for 100244527	vvi-u.5 for 100267358	vvi-u.5 for 100263191	ppo-u.5 for 18100499	ppo-u.5 for 7488974	ppo-u.5 for 7495538	mtr-u.5 for 25490772	mtr-u.5 for 11446478	mtr-u.5 for 25497863	ghi-r.1 for 121225368	ghi-r.1 for 121225377	bna-r.1 for 106451040	bna-r.1 for 106447366	bna-r.1 for 106446920	cit-r.1 for 102629767	cit-r.1 for 102630591	cit-r.1 for 102614670	osa-u.5 for 4330345	osa-u.5 for 9270544	osa-u.5 for 4331427	zma-u.5 for 100278340	zma-u.5 for 100282268	zma-u.5 for 103631010	tae-r.2 for 123093840	tae-r.2 for 123051161	tae-r.2 for 123049796	hvu-r.1 for 123403735	hvu-r.1 for 123397931	hvu-r.1 for 123427637	sbi-r.1 for 8056569	sbi-r.1 for 8058810	sbi-r.1 for 8078508	bdi-r.1 for 100824697	bdi-r.1 for 104584388	bdi-r.1 for 100845127	cre-r.1 for CHLRE_06g265450v5	cre-r.1 for CHLRE_06g265200v5	cre-r.1 for CHLRE_17g714600v5

Ortholog

Ortholog ID: 87

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

HIS4

Function^*

histone H4

uncharacterized LOC102605056

histone H4

Histone superfamily protein

histone H4

uncharacterized LOC100244527

histone H4

uncharacterized LOC107932445

histone H4

uncharacterized LOC100278340

histone H4

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	5
sot03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00240	Pyrimidine metabolism	2
sot01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot03440	Homologous recombination	2
sot03460	Fanconi anemia pathway	2
sot03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00240	Pyrimidine metabolism	3
vvi01232	Nucleotide metabolism	3
vvi03030	DNA replication	2
vvi03420	Nucleotide excision repair	2
vvi03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

101252889

101264401

102597419

102605372

102605056

107777308

107816714

107798291

837279

836119

817423

100804633

100793106

100800769

103841295

103829765

103865608

100244527

100267358

100263191

18100499

18099206

18099209

25497863

11433555

11440148

107932686

107959073

107932445

106447366

106437381

106347525

102629767

102630591

102614670

9270544

4339029

4349248

100278340

103633162

103636523

123041830

123046420

123065861

123401490

123413523

123445002

8060296

8061791

8077977

100843591

100823315

100845838

66053633

66055937

5716482

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	3	3	3	2	3	3	3	2	3	3	3	3	3	3	3	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101248209 (sly-u.5 coexpression data)

Top 50 enrichment test to 101248209 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**