ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101266039	sister chromatid cohesion protein PDS5 homolog D-like
sly-u.5	101244883	sister chromatid cohesion protein PDS5 homolog C-like
sly-u.5	101246231	sister chromatid cohesion protein PDS5 homolog E
sot-r.1	102579340	sister chromatid cohesion protein PDS5 homolog A-like
sot-r.1	102591295	uncharacterized LOC102591295
sot-r.1	102591624	uncharacterized LOC102591624
nta-r.1	107818446	sister chromatid cohesion protein PDS5 homolog D-like
nta-r.1	107809834	sister chromatid cohesion protein PDS5 homolog D
nta-r.1	107767311	sister chromatid cohesion protein PDS5 homolog D
ath-u.5	AT4G31880	transcriptional regulator
ath-u.5	AT5G10950	Tudor/PWWP/MBT superfamily protein
ath-u.5	AT1G15940	Tudor/PWWP/MBT superfamily protein
gma-u.5	100818050	uncharacterized LOC100818050
gma-u.5	100812058	uncharacterized LOC100812058
bra-r.6	103851468	DNA ligase 1
bra-r.6	103836009	glutamic acid-rich protein
bra-r.6	103832454	glutamic acid-rich protein
vvi-u.5	100248351	sister chromatid cohesion protein PDS5 homolog C
vvi-u.5	100260975	sister chromatid cohesion protein PDS5 homolog C
ppo-u.5	7493403	uncharacterized LOC7493403
ppo-u.5	7465412	sister chromatid cohesion protein PDS5 homolog C
ppo-u.5	7487059	sister chromatid cohesion protein PDS5 homolog D
mtr-u.5	11437017	sister chromatid cohesion protein PDS5
mtr-u.5	11423336	muscle M-line assembly protein unc-89
mtr-u.5	25491183	uncharacterized LOC25491183
ghi-r.1	107906838	triadin
ghi-r.1	107906837	triadin
ghi-r.1	107901619	nucleolar and coiled-body phosphoprotein 1
bna-r.1	106420502	sister chromatid cohesion protein PDS5 homolog C-like
bna-r.1	106423380	sister chromatid cohesion protein PDS5 homolog C
bna-r.1	106430116	sister chromatid cohesion protein PDS5 homolog D
cit-r.1	102624143	sister chromatid cohesion protein PDS5 homolog C
cit-r.1	102614026	sister chromatid cohesion protein PDS5 homolog C-like
osa-u.5	4336311	sister chromatid cohesion protein PDS5 homolog C
osa-u.5	9266945	sister chromatid cohesion protein PDS5 homolog C
osa-u.5	4329966	sister chromatid cohesion protein PDS5 homolog C
zma-u.5	103641817	enolase-phosphatase E1
zma-u.5	109939418	uncharacterized LOC109939418
zma-u.5	103654690	sister chromatid cohesion protein PDS5 homolog B-B-like
tae-r.2	123189678	protein hsr-9
tae-r.2	123137451	neurofilament heavy polypeptide
hvu-r.1	123427162	ABC transporter F family member 4-like
hvu-r.1	123401818	neurofilament heavy polypeptide-like
sbi-r.1	8059675	microtubule-associated protein futsch
sbi-r.1	8066696	uncharacterized LOC8066696
sbi-r.1	8071467	MATH and LRR domain-containing protein PFE0570w
bdi-r.1	100823597	muscle M-line assembly protein unc-89
bdi-r.1	100825062	uncharacterized LOC100825062
cre-r.1	CHLRE_01g032550v5	uncharacterized protein
cre-r.1	CHLRE_02g099601v5	uncharacterized protein

Top 50 coexpressed genes to 101266039 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101266039 (sly-u.5 coexpression data)

CoexMap"138349172"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007064 [list] [network] mitotic sister chromatid cohesion	(20 genes)	IEA
GO:0006281 [list] [network] DNA repair	(281 genes)	IEA

GO CC

GO:0000785 [list] [network] chromatin	(240 genes)	IEA
GO:0005634 [list] [network] nucleus	(2947 genes)	IEA

GO MF

Protein

XP_069155481.1 [sequence] [blastp]
XP_069155482.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 4	(predict for XP_069155481.1)
nucl 6, cyto 4	(predict for XP_069155482.1)

Subcellular
localization
TargetP

other 8	(predict for XP_069155481.1)
other 8	(predict for XP_069155482.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101266039	sly-u.5 for 101244883	sly-u.5 for 101246231	sot-r.1 for 102579340	sot-r.1 for 102591295	sot-r.1 for 102591624	nta-r.1 for 107818446	nta-r.1 for 107809834	nta-r.1 for 107767311	ath-u.5 for AT4G31880	ath-u.5 for AT5G10950	ath-u.5 for AT1G15940	gma-u.5 for 100818050	gma-u.5 for 100812058	bra-r.6 for 103851468	bra-r.6 for 103836009	bra-r.6 for 103832454	vvi-u.5 for 100248351	vvi-u.5 for 100260975	ppo-u.5 for 7493403	ppo-u.5 for 7465412	ppo-u.5 for 7487059	mtr-u.5 for 11437017	mtr-u.5 for 11423336	mtr-u.5 for 25491183	ghi-r.1 for 107906838	ghi-r.1 for 107906837	ghi-r.1 for 107901619	bna-r.1 for 106420502	bna-r.1 for 106423380	bna-r.1 for 106430116	cit-r.1 for 102624143	cit-r.1 for 102614026	osa-u.5 for 4336311	osa-u.5 for 9266945	osa-u.5 for 4329966	zma-u.5 for 103641817	zma-u.5 for 109939418	zma-u.5 for 103654690	tae-r.2 for 123189678	tae-r.2 for 123137451	hvu-r.1 for 123427162	hvu-r.1 for 123401818	sbi-r.1 for 8059675	sbi-r.1 for 8066696	sbi-r.1 for 8071467	bdi-r.1 for 100823597	bdi-r.1 for 100825062	cre-r.1 for CHLRE_01g032550v5	cre-r.1 for CHLRE_02g099601v5

Ortholog

Ortholog ID: 597

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

sister chromatid cohesion protein PDS5 homolog E

sister chromatid cohesion protein PDS5 homolog D-like

uncharacterized LOC102591295

uncharacterized LOC102591624

muscle M-line assembly protein unc-89

sister chromatid cohesion protein PDS5 homolog D

sister chromatid cohesion protein PDS5 homolog C-like

sister chromatid cohesion protein PDS5 homolog D

transcriptional regulator

Tudor/PWWP/MBT superfamily protein

uncharacterized LOC100812058

muscle M-line assembly protein unc-89

cinnamoyl-CoA reductase 1

DEAD-box ATP-dependent RNA helicase 28

neurofilament heavy polypeptide

sister chromatid cohesion protein PDS5 homolog C

uncharacterized LOC7493403

sister chromatid cohesion protein PDS5 homolog D

sister chromatid cohesion protein PDS5

muscle M-line assembly protein unc-89

triadin

WASH complex subunit 2

sister chromatid cohesion protein PDS5 homolog C-like

sister chromatid cohesion protein PDS5 homolog D-like

sister chromatid cohesion protein PDS5 homolog E-like

sister chromatid cohesion protein PDS5 homolog C

sister chromatid cohesion protein PDS5 homolog C-like

sister chromatid cohesion protein PDS5 homolog C

sister chromatid cohesion protein PDS5 homolog D

sister chromatid cohesion protein PDS5 homolog B-B-like

uncharacterized LOC103653756

titin homolog

neurofilament heavy polypeptide

nucleolar protein dao-5

ABC transporter F family member 4-like

neurofilament heavy polypeptide-like

microtubule-associated protein futsch

MATH and LRR domain-containing protein PFE0570w

enolase-phosphatase E1

muscle M-line assembly protein unc-89

uncharacterized LOC100825062

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03410	Base excision repair	3
ppo00010	Glycolysis / Gluconeogenesis	2
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	4
ghi03013	Nucleocytoplasmic transport	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03410	Base excision repair	2
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	3
bdi03013	Nucleocytoplasmic transport	2
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

101246231

101253678

102591295

102591624

102605879

107767311

107772436

107830807

829318

838164

844420

100812058

100790092

103842872

103855892

103862094

100248351

100260975

7493403

7487059

7493222

11437017

11423336

11442229

107906838

107906837

107953744

106420502

106430760

106346800

102624143

102614026

4336311

9266945

4335488

103654690

103653756

103646255

123137451

123144807

123045941

123427162

123401818

8059675

8071467

8060213

100823597

100825062

5715404

66052408

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	3	3	2	3	2	3	3	3	3	2	3	3	2	2	3	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101266039 (sly-u.5 coexpression data)

Top 50 enrichment test to 101266039 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**