ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	142175421	putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
nta-r.1	107826391	putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
nta-r.1	107810838	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
nta-r.1	107825525	putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sly-u.5	101245612	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sly-u.5	101259279	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
sly-u.5	101247563	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sot-r.1	102580076	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
sot-r.1	102585196	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
sot-r.1	102586120	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
ath-u.5	TPS11	trehalose phosphatase/synthase 11
ath-u.5	TPS8	trehalose-6-phosphatase synthase S8
ath-u.5	ATTPS6	UDP-Glycosyltransferase / trehalose-phosphatase family protein
gma-u.5	100818822	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
gma-u.5	100814952	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
gma-u.5	100812116	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
bra-r.6	103830990	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
bra-r.6	103862621	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10
bra-r.6	103835645	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
vvi-u.5	100259175	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
vvi-u.5	100251811	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
vvi-u.5	100255689	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
ppo-u.5	18094142	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
ppo-u.5	7465995	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
ppo-u.5	7458026	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
mtr-u.5	25501287	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
mtr-u.5	25482569	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
mtr-u.5	11418348	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
ghi-r.1	107886610	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
ghi-r.1	107886340	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
bna-r.1	106441723	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
bna-r.1	111213570	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
bna-r.1	111197752	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like
cit-r.1	102611843	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
cit-r.1	102629877	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
osa-u.5	4332112	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
osa-u.5	4330971	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
osa-u.5	4339327	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
zma-u.5	100281927	uncharacterized LOC100281927
zma-u.5	100501482	uncharacterized LOC100501482
zma-u.5	100501519	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
tae-r.2	123098192	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
tae-r.2	123145852	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
tae-r.2	123062055	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
hvu-r.1	123449266	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like
hvu-r.1	123447107	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
hvu-r.1	123406139	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8
sbi-r.1	8085273	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
sbi-r.1	8055795	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
sbi-r.1	8072076	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
bdi-r.1	100829189	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
bdi-r.1	100826807	alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
bdi-r.1	100824241	probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
cre-r.1	CHLRE_06g278221v5	uncharacterized protein

Top 50 coexpressed genes to 142175421 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 142175421 (nta-r.1 coexpression data)

CoexMap"142175421"

[Cytoscape]

Annotation

functional annotation

KEGG

nta00500 [list] [network] Starch and sucrose metabolism (286 genes)

GO BP

GO:0005992 [list] [network] trehalose biosynthetic process

(36 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol

(1509 genes)

IEA

GO MF

GO:0004805 [list] [network] trehalose-phosphatase activity

(36 genes)

IEA

Protein

XP_075098226.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, nucl 1, cysk 1, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_075098226.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_075098226.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 142175421	nta-r.1 for 107826391	nta-r.1 for 107810838	nta-r.1 for 107825525	sly-u.5 for 101245612	sly-u.5 for 101259279	sly-u.5 for 101247563	sot-r.1 for 102580076	sot-r.1 for 102585196	sot-r.1 for 102586120	ath-u.5 for TPS11	ath-u.5 for TPS8	ath-u.5 for ATTPS6	gma-u.5 for 100818822	gma-u.5 for 100814952	gma-u.5 for 100812116	bra-r.6 for 103830990	bra-r.6 for 103862621	bra-r.6 for 103835645	vvi-u.5 for 100259175	vvi-u.5 for 100251811	vvi-u.5 for 100255689	ppo-u.5 for 18094142	ppo-u.5 for 7465995	ppo-u.5 for 7458026	mtr-u.5 for 25501287	mtr-u.5 for 25482569	mtr-u.5 for 11418348	ghi-r.1 for 107886610	ghi-r.1 for 107886340	bna-r.1 for 106441723	bna-r.1 for 111213570	bna-r.1 for 111197752	cit-r.1 for 102611843	cit-r.1 for 102629877	osa-u.5 for 4332112	osa-u.5 for 4330971	osa-u.5 for 4339327	zma-u.5 for 100281927	zma-u.5 for 100501482	zma-u.5 for 100501519	tae-r.2 for 123098192	tae-r.2 for 123145852	tae-r.2 for 123062055	hvu-r.1 for 123449266	hvu-r.1 for 123447107	hvu-r.1 for 123406139	sbi-r.1 for 8085273	sbi-r.1 for 8055795	sbi-r.1 for 8072076	bdi-r.1 for 100829189	bdi-r.1 for 100826807	bdi-r.1 for 100824241	cre-r.1 for CHLRE_06g278221v5

Ortholog

Ortholog ID: 237

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

TPS11

TPS10

TPS7

Function^*

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

trehalose phosphatase/synthase 11

trehalose phosphate synthase

trehalose-phosphatase/synthase 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

putative trehalose phosphatase/synthase family protein

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8

alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly01250	Biosynthesis of nucleotide sugars	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	4
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2
ath04145	Phagosome	2
ath04148	Efferocytosis	2
ath04517	IgSF CAM signaling	2
ath04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	4
gma00640	Propanoate metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma00230	Purine metabolism	2
gma00232	Caffeine metabolism	2
gma01232	Nucleotide metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3
bra03050	Proteasome	3
bra04120	Ubiquitin mediated proteolysis	2
bra01200	Carbon metabolism	2
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3
vvi00500	Starch and sucrose metabolism	2
vvi04075	Plant hormone signal transduction	2
vvi00053	Ascorbate and aldarate metabolism	2
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00250	Alanine, aspartate and glutamate metabolism	2
vvi04016	MAPK signaling pathway - plant	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00100	Steroid biosynthesis	2
ghi00561	Glycerolipid metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00440	Phosphonate and phosphinate metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	7
bna00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	4
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	6
osa04016	MAPK signaling pathway - plant	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma00500	Starch and sucrose metabolism	2
zma00380	Tryptophan metabolism	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00051	Fructose and mannose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	6
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

107810838

107825166

107808783

101259279

101255690

101262611

102586120

102583599

107058011

816385

842309

837152

100810498

100800847

100787744

103862621

103852641

103836479

100259175

100253824

100246842

7465995

7457812

7462667

25501287

25482569

11428387

107886610

107886340

107909640

111213570

106415110

106440216

102611843

102612059

102626436

4324621

4324423

4346917

100501519

109942025

100191265

123062055

123079168

123182644

123447107

123406139

8085273

8082723

8075095

100829189

100821815

100844084

5723623

The preparation time of this page was 0.2 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	3	2	3	2	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 142175421 (nta-r.1 coexpression data)

Top 50 enrichment test to 142175421 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**