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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142177610   polygalacturonase-like 
 nta-r.1   107778498   putative polygalacturonase At1g80170 
 nta-r.1   107779724   putative polygalacturonase At1g80170 
 nta-r.1   107779855   probable polygalacturonase At1g80170 
 sot-r.1   102594305   probable polygalacturonase At1g80170 
 sot-r.1   102581953   polygalacturonase-like 
 sot-r.1   102585179   probable polygalacturonase At1g80170 
 ath-u.5   AT1G80170   Pectin lyase-like superfamily protein 
 ath-u.5   PGAZAT   polygalacturonase ADPG2-like protein 
 bra-r.6   103870621   polygalacturonase QRT2-like 
 vvi-u.5   100243033   polygalacturonase 
 vvi-u.5   100257239   polygalacturonase 
 ppo-u.5   7473629   polygalacturonase 
 mtr-u.5   11433078   probable polygalacturonase At1g80170 
 mtr-u.5   11444474   polygalacturonase 
 ghi-r.1   107889398   polygalacturonase 
 ghi-r.1   107914715   probable polygalacturonase At1g80170 
 ghi-r.1   107918834   polygalacturonase QRT2 
 cit-r.1   102609776   polygalacturonase 
 cit-r.1   PG   polygalacturonase 
 osa-u.5   4339483   probable polygalacturonase At1g80170 
 zma-u.5   100285523   polygalacturonase 
 zma-u.5   103644217   polygalacturonase 
 bdi-r.1   100823204   polygalacturonase ADPG1 

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Top 50 coexpressed genes to 142177610 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142177610 (nta-r.1 coexpression data)

CoexMap"142177610"


ntaLOC142177610 | Entrez gene ID : 142177610    
Species nta sot ath bra vvi ppo mtr ghi cit osa zma bdi gma cre sbi sly tae bna hvu
Paralog 4 3 2 1 2 1 2 3 2 1 2 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00040 [list] [network] Pentose and glucuronate interconversions (239 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1425 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (108 genes)  IEA  
Protein XP_075102928.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 3,  vacu 1,  mito 1,  E.R. 1,  golg 1  (predict for XP_075102928.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_075102928.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142177610
nta-r.1
for
107778498
nta-r.1
for
107779724
nta-r.1
for
107779855
sot-r.1
for
102594305
sot-r.1
for
102581953
sot-r.1
for
102585179
ath-u.5
for
AT1G80170
ath-u.5
for
PGAZAT
bra-r.6
for
103870621
vvi-u.5
for
100243033
vvi-u.5
for
100257239
ppo-u.5
for
7473629
mtr-u.5
for
11433078
mtr-u.5
for
11444474
ghi-r.1
for
107889398
ghi-r.1
for
107914715
ghi-r.1
for
107918834
cit-r.1
for
102609776
cit-r.1
for
PG
osa-u.5
for
4339483
zma-u.5
for
100285523
zma-u.5
for
103644217
bdi-r.1
for
100823204


Ortholog ID: 458
Species nta nta nta sly sly sot sot ath ath bra vvi vvi ppo mtr ghi cit cit osa zma zma bdi
Symbol LOC107779855 LOC107805711 LOC107824130 LOC101264436 PG2 LOC102594305 LOC102585179 AT1G80170 QRT2 LOC103830105 LOC100243033 LOC100265326 LOC7478117 LOC11433078 LOC107950651 LOC102609776 PG LOC4339483 LOC103644217 LOC103644218 LOC100829282
Function* probable polygalacturonase At1g80170 polygalacturonase-like polygalacturonase-2-like probable polygalacturonase At1g80170 polygalacturonase-2a probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein polygalacturonase ADPG1 polygalacturonase polygalacturonase probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase QRT2 polygalacturonase polygalacturonase probable polygalacturonase At1g80170 polygalacturonase polygalacturonase ADPG1 uncharacterized LOC100829282
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta04142 Lysosome 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04517 IgSF CAM signaling 2
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath04981 Folate transport and metabolism 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 3
vvi00062 Fatty acid elongation 3
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107779855 107805711 107824130 101264436 544051 102594305 102585179 844357 819988 103830105 100243033 100265326 7478117 11433078 107950651 102609776 102578026 4339483 103644217 103644218 100829282
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