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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142182262   uncharacterized LOC142182262 
 sly-u.5   101257041   uncharacterized LOC101257041 
 ath-u.5   AT5G60590   DHBP synthase RibB-like alpha/beta domain-containing protein 
 gma-u.5   100791087   yrdC domain-containing protein, mitochondrial 
 gma-u.5   100777085   yrdC domain-containing protein, mitochondrial 
 vvi-u.5   100251962   uncharacterized LOC100251962 
 ppo-u.5   7488149   uncharacterized LOC7488149 
 mtr-u.5   25494422   yrdC domain-containing protein, mitochondrial 
 osa-u.5   4331975   uncharacterized LOC4331975 
 zma-u.5   100282574   ischemia/reperfusion inducible protein 

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Top 50 coexpressed genes to 142182262 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142182262 (nta-r.1 coexpression data)

CoexMap"142182262"


ntaLOC142182262 | Entrez gene ID : 142182262    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006450 [list] [network] regulation of translational fidelity  (12 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0003725 [list] [network] double-stranded RNA binding  (30 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (65 genes)  IEA  
GO:0016779 [list] [network] nucleotidyltransferase activity  (219 genes)  IEA  
Protein XP_075112528.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  cysk 1,  vacu 1,  golg 1,  cysk_nucl 1,  cysk_plas 1  (predict for XP_075112528.1)
Subcellular
localization
TargetP
other 8  (predict for XP_075112528.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142182262
sly-u.5
for
101257041
ath-u.5
for
AT5G60590
gma-u.5
for
100791087
gma-u.5
for
100777085
vvi-u.5
for
100251962
ppo-u.5
for
7488149
mtr-u.5
for
25494422
osa-u.5
for
4331975
zma-u.5
for
100282574


Ortholog ID: 8206
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC142161928 LOC107769886 LOC101257041 LOC102578483 AT5G60590 LOC100791087 LOC100777085 LOC103845474 LOC100251962 LOC7488149 LOC25494422 LOC107936069 LOC107930504 LOC106365751 LOC106370392 LOC102630893 LOC4331975 LOC100282574 LOC123093080 LOC123084985 LOC123449405 LOC8054234 LOC100836001 CHLRE_05g234657v5
Function* uncharacterized LOC142161928 uncharacterized LOC107769886 uncharacterized LOC101257041 yrdC domain-containing protein, mitochondrial DHBP synthase RibB-like alpha/beta domain-containing protein yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial uncharacterized LOC100251962 uncharacterized LOC7488149 yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial threonylcarbamoyl-AMP synthase threonylcarbamoyl-AMP synthase uncharacterized LOC102630893 uncharacterized LOC4331975 ischemia/reperfusion inducible protein yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial yrdC domain-containing protein, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00780 Biotin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00062 Fatty acid elongation 3
ppo01040 Biosynthesis of unsaturated fatty acids 3
ppo01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 142161928 107769886 101257041 102578483 836180 100791087 100777085 103845474 100251962 7488149 25494422 107936069 107930504 106365751 106370392 102630893 4331975 100282574 123093080 123084985 123449405 8054234 100836001 5726194
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