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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094663   RING-H2 finger protein ATL3 
 ppo-r.4   18094663   RING-H2 finger protein ATL3 
 ppo-u.5   7461958   RING-H2 finger protein ATL3 
 gma-u.5   100797420   RING-H2 finger protein ATL3 
 gma-u.5   100777158   RING-H2 finger protein ATL3 
 gma-u.5   100775523   RING-H2 finger protein ATL3 
 mtr-u.5   25499753   RING-H2 finger protein ATL3 
 mtr-u.5   11441359   RING-H2 finger protein ATL60 
 ath-u.5   ATL3   RING/U-box superfamily protein 
 vvi-u.5   100267019   RING-H2 finger protein ATL3 
 sly-u.5   101254104   RING-H2 finger protein ATL3 
 sly-u.5   101251958   RING-H2 finger protein ATL3-like 
 sly-u.5   101244650   RING-H2 finger protein ATL3-like 
 osa-u.5   4340377   RING-H2 finger protein ATL3 
 zma-u.5   107521953   Zinc finger nuclease2 
 zma-u.5   103629867   RING-H2 finger protein ATL3 

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Top 50 coexpressed genes to 18094663 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094663 (ppo-u.5 coexpression data)

CoexMap"18094663"


ppoLOC18094663 | Entrez gene ID : 18094663    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 1 1 3 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (4072 genes)  IEA  
Protein XP_006369074.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_006369074.1)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for XP_006369074.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094663

.
ppo-r.4
for
18094663

.
ppo-u.5
for
7461958

.
gma-u.5
for
100797420

.
gma-u.5
for
100777158

.
gma-u.5
for
100775523

.
mtr-u.5
for
25499753

.
mtr-u.5
for
11441359

.
ath-u.5
for
ATL3

.
vvi-u.5
for
100267019

.
sly-u.5
for
101254104

.
sly-u.5
for
101251958

.
sly-u.5
for
101244650

.
osa-u.5
for
4340377

.
zma-u.5
for
107521953

.
zma-u.5
for
103629867

.


Ortholog ID: 3751
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi bna sbi sot cit bdi nta nta
Symbol ATL3 LOC100775523 LOC100777158 LOC101251958 LOC101254104 LOC4340377 LOC103629867 LOC107521953 LOC103848508 LOC103831742 LOC100267019 LOC7461958 LOC18094663 LOC25499753 LOC11441359 LOC123168519 LOC123157042 LOC123410299 LOC107958341 LOC106433039 LOC8077293 LOC107062603 LOC102617802 LOC100842318 LOC107775246 LOC107762512
Function* RING/U-box superfamily protein RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3-like RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 Zinc finger nuclease2 RING-H2 finger protein ATL60 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL60 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3-like RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 E3 ubiquitin-protein ligase EL5 RING-H2 finger protein ATL3-like RING-H2 finger protein ATL60 RING-H2 finger protein ATL3 RING-H2 finger protein ATL60-like RING-H2 finger protein ATL60-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 6
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 5
bdi04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04712 Circadian rhythm - plant 2
nta00071 Fatty acid degradation 2
nta00592 alpha-Linolenic acid metabolism 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843563 100775523 100777158 101251958 101254104 4340377 103629867 107521953 103848508 103831742 100267019 7461958 18094663 25499753 11441359 123168519 123157042 123410299 107958341 106433039 8077293 107062603 102617802 100842318 107775246 107762512
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